Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.2□□□□□ -0.14
VBP1P61758 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.2□□□□□ -0.14
VBP1P61758 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.2□□□□□ -0.14
VBP1P61758 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.2□□□□□ -0.14
VBP1P61758 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 SLC25A6P2-201ENST00000497974 877 ntBASIC14.2□□□□□ -0.14
VBP1P61758 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.2□□□□□ -0.14
VBP1P61758 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.2□□□□□ -0.14
VBP1P61758 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.2□□□□□ -0.14
VBP1P61758 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.2□□□□□ -0.14
VBP1P61758 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VBP1P61758 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VBP1P61758 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.2□□□□□ -0.14
VBP1P61758 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
VBP1P61758 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VBP1P61758 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VBP1P61758 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
VBP1P61758 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.19□□□□□ -0.14
VBP1P61758 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 AC089987.1-201ENST00000551654 2209 ntBASIC14.19□□□□□ -0.14
VBP1P61758 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.19□□□□□ -0.14
VBP1P61758 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
VBP1P61758 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.19□□□□□ -0.14
VBP1P61758 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.19□□□□□ -0.14
VBP1P61758 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
VBP1P61758 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 AL645929.1-201ENST00000420084 975 ntBASIC14.19□□□□□ -0.14
VBP1P61758 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.19□□□□□ -0.14
VBP1P61758 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 AC096582.2-201ENST00000510860 516 ntBASIC14.19□□□□□ -0.14
VBP1P61758 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
VBP1P61758 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.19□□□□□ -0.14
VBP1P61758 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.19□□□□□ -0.14
VBP1P61758 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.19□□□□□ -0.14
VBP1P61758 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VBP1P61758 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VBP1P61758 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
VBP1P61758 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VBP1P61758 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.19□□□□□ -0.14
VBP1P61758 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.19□□□□□ -0.14
VBP1P61758 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
VBP1P61758 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VBP1P61758 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.18□□□□□ -0.14
VBP1P61758 AC087386.2-201ENST00000623212 4637 ntBASIC14.18□□□□□ -0.14
VBP1P61758 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
VBP1P61758 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
VBP1P61758 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
VBP1P61758 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.18□□□□□ -0.14
VBP1P61758 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VBP1P61758 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms