Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN6P56747 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN6P56747 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN6P56747 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN6P56747 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN6P56747 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN6P56747 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CLDN6P56747 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN6P56747 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN6P56747 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN6P56747 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CLDN6P56747 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CLDN6P56747 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLDN6P56747 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN6P56747 AL592424.1-201ENST00000563624 1536 ntBASIC15.09■□□□□ 0.01
CLDN6P56747 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLDN6P56747 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN6P56747 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN6P56747 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN6P56747 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN6P56747 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN6P56747 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.09■□□□□ 0.01
CLDN6P56747 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN6P56747 AC007969.1-201ENST00000433675 447 ntBASIC15.09■□□□□ 0.01
CLDN6P56747 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC15.09■□□□□ 0.01
CLDN6P56747 RPL13AP25-201ENST00000484130 612 ntBASIC15.09■□□□□ 0.01
CLDN6P56747 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN6P56747 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.09■□□□□ 0.01
CLDN6P56747 AP001582.1-201ENST00000525856 295 ntBASIC15.09■□□□□ 0.01
CLDN6P56747 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN6P56747 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
CLDN6P56747 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN6P56747 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
CLDN6P56747 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN6P56747 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.09■□□□□ 0.01
CLDN6P56747 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.09■□□□□ 0.01
CLDN6P56747 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.09■□□□□ 0.01
CLDN6P56747 AC008687.7-202ENST00000637404 953 ntBASIC15.09■□□□□ 0.01
CLDN6P56747 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN6P56747 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN6P56747 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN6P56747 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN6P56747 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN6P56747 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN6P56747 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN6P56747 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN6P56747 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN6P56747 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN6P56747 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN6P56747 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN6P56747 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN6P56747 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN6P56747 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN6P56747 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN6P56747 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN6P56747 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN6P56747 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN6P56747 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN6P56747 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0.01
CLDN6P56747 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN6P56747 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN6P56747 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN6P56747 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN6P56747 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN6P56747 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN6P56747 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.08■□□□□ 0.01
CLDN6P56747 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
CLDN6P56747 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.08■□□□□ 0
CLDN6P56747 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.08■□□□□ 0
CLDN6P56747 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CLDN6P56747 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
CLDN6P56747 ELK2AP-201ENST00000392510 1007 ntBASIC15.08■□□□□ 0
CLDN6P56747 AC092506.1-202ENST00000401022 528 ntBASIC15.08■□□□□ 0
CLDN6P56747 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 C2orf27AP3-201ENST00000434123 579 ntBASIC15.08■□□□□ 0
CLDN6P56747 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.08■□□□□ 0
CLDN6P56747 AC078819.1-201ENST00000547454 765 ntBASIC15.08■□□□□ 0
CLDN6P56747 AC012085.1-201ENST00000548270 765 ntBASIC15.08■□□□□ 0
CLDN6P56747 DUX4L45-201ENST00000566406 1057 ntBASIC15.08■□□□□ 0
CLDN6P56747 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.08■□□□□ 0
CLDN6P56747 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CLDN6P56747 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.08■□□□□ 0
CLDN6P56747 AL022328.3-201ENST00000607943 679 ntBASIC15.08■□□□□ 0
CLDN6P56747 AL354718.3-201ENST00000616414 581 ntBASIC15.08■□□□□ 0
CLDN6P56747 CR382287.1-201ENST00000623954 586 ntBASIC15.08■□□□□ 0
CLDN6P56747 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.08■□□□□ 0
CLDN6P56747 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN6P56747 AC018892.3-201ENST00000623986 2499 ntBASIC15.08■□□□□ 0
CLDN6P56747 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms