Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH13P55290 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.47■□□□□ 0.07
CDH13P55290 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CDH13P55290 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH13P55290 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH13P55290 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH13P55290 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH13P55290 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CDH13P55290 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH13P55290 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH13P55290 AL592309.1-201ENST00000443127 649 ntBASIC15.47■□□□□ 0.07
CDH13P55290 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CDH13P55290 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.47■□□□□ 0.07
CDH13P55290 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH13P55290 KRT8P23-201ENST00000560090 1207 ntBASIC15.47■□□□□ 0.07
CDH13P55290 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.47■□□□□ 0.07
CDH13P55290 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.47■□□□□ 0.07
CDH13P55290 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.47■□□□□ 0.07
CDH13P55290 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CDH13P55290 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.47■□□□□ 0.07
CDH13P55290 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.47■□□□□ 0.07
CDH13P55290 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CDH13P55290 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.47■□□□□ 0.07
CDH13P55290 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.47■□□□□ 0.07
CDH13P55290 C20orf181-201ENST00000623918 480 ntBASIC15.47■□□□□ 0.07
CDH13P55290 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH13P55290 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
CDH13P55290 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.47■□□□□ 0.07
CDH13P55290 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.47■□□□□ 0.07
CDH13P55290 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.47■□□□□ 0.07
CDH13P55290 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.47■□□□□ 0.07
CDH13P55290 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH13P55290 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.47■□□□□ 0.07
CDH13P55290 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH13P55290 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH13P55290 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH13P55290 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
CDH13P55290 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH13P55290 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH13P55290 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH13P55290 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH13P55290 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH13P55290 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH13P55290 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH13P55290 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH13P55290 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH13P55290 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH13P55290 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH13P55290 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH13P55290 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH13P55290 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH13P55290 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH13P55290 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH13P55290 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH13P55290 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH13P55290 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH13P55290 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH13P55290 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH13P55290 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
CDH13P55290 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.46■□□□□ 0.07
CDH13P55290 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH13P55290 MIR574-201ENST00000385209 96 ntBASIC15.46■□□□□ 0.07
CDH13P55290 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH13P55290 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH13P55290 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH13P55290 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.46■□□□□ 0.07
CDH13P55290 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.46■□□□□ 0.07
CDH13P55290 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.46■□□□□ 0.07
CDH13P55290 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.46■□□□□ 0.07
CDH13P55290 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.46■□□□□ 0.07
CDH13P55290 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.46■□□□□ 0.07
CDH13P55290 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH13P55290 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH13P55290 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CDH13P55290 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH13P55290 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH13P55290 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH13P55290 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH13P55290 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH13P55290 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH13P55290 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CDH13P55290 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CDH13P55290 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.06
CDH13P55290 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CDH13P55290 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CDH13P55290 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CDH13P55290 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CDH13P55290 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CDH13P55290 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH13P55290 CICP24-201ENST00000605464 2705 ntBASIC15.45■□□□□ 0.06
CDH13P55290 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CDH13P55290 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
CDH13P55290 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH13P55290 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH13P55290 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH13P55290 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH13P55290 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CDH13P55290 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH13P55290 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH13P55290 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms