Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.97□□□□□ -0.01
CASP9P55211 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP9P55211 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP9P55211 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CASP9P55211 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.97□□□□□ -0.01
CASP9P55211 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.97□□□□□ -0.01
CASP9P55211 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.97□□□□□ -0.01
CASP9P55211 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP9P55211 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP9P55211 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP9P55211 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CASP9P55211 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP9P55211 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP9P55211 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.97□□□□□ -0.01
CASP9P55211 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP9P55211 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CASP9P55211 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.97□□□□□ -0.01
CASP9P55211 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.97□□□□□ -0.01
CASP9P55211 MCCD1P2-201ENST00000423228 335 ntBASIC14.97□□□□□ -0.01
CASP9P55211 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.97□□□□□ -0.01
CASP9P55211 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.97□□□□□ -0.01
CASP9P55211 AC092183.1-201ENST00000469884 875 ntBASIC14.97□□□□□ -0.01
CASP9P55211 RN7SL589P-201ENST00000481268 310 ntBASIC14.97□□□□□ -0.01
CASP9P55211 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.97□□□□□ -0.01
CASP9P55211 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP9P55211 SLC25A39P2-201ENST00000537614 270 ntBASIC14.97□□□□□ -0.01
CASP9P55211 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.97□□□□□ -0.01
CASP9P55211 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP9P55211 MIR4313-201ENST00000580760 101 ntBASIC14.97□□□□□ -0.01
CASP9P55211 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CASP9P55211 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CASP9P55211 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.97□□□□□ -0.01
CASP9P55211 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP9P55211 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
CASP9P55211 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP9P55211 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.97□□□□□ -0.01
CASP9P55211 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.97□□□□□ -0.01
CASP9P55211 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP9P55211 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP9P55211 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.97□□□□□ -0.01
CASP9P55211 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.97□□□□□ -0.01
CASP9P55211 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP9P55211 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.97□□□□□ -0.01
CASP9P55211 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CASP9P55211 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP9P55211 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP9P55211 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP9P55211 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CASP9P55211 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CASP9P55211 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.96□□□□□ -0.01
CASP9P55211 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CASP9P55211 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.96□□□□□ -0.01
CASP9P55211 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.96□□□□□ -0.01
CASP9P55211 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CASP9P55211 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CASP9P55211 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CASP9P55211 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.96□□□□□ -0.01
CASP9P55211 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CASP9P55211 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CASP9P55211 C18orf15-201ENST00000623680 2534 ntBASIC14.96□□□□□ -0.01
CASP9P55211 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.96□□□□□ -0.01
CASP9P55211 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CASP9P55211 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CASP9P55211 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CASP9P55211 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CASP9P55211 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CASP9P55211 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CASP9P55211 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.96□□□□□ -0.01
CASP9P55211 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.96□□□□□ -0.01
CASP9P55211 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CASP9P55211 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.96□□□□□ -0.01
CASP9P55211 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.96□□□□□ -0.01
CASP9P55211 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.96□□□□□ -0.01
CASP9P55211 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CASP9P55211 HTR5BP-201ENST00000430851 1154 ntBASIC14.96□□□□□ -0.01
CASP9P55211 AL592309.1-201ENST00000443127 649 ntBASIC14.96□□□□□ -0.01
CASP9P55211 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CASP9P55211 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.96□□□□□ -0.01
CASP9P55211 AC069335.1-201ENST00000489972 472 ntBASIC14.96□□□□□ -0.01
CASP9P55211 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.96□□□□□ -0.01
CASP9P55211 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.96□□□□□ -0.01
CASP9P55211 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.96□□□□□ -0.01
CASP9P55211 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CASP9P55211 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.96□□□□□ -0.01
CASP9P55211 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.96□□□□□ -0.01
CASP9P55211 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.96□□□□□ -0.01
CASP9P55211 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.96□□□□□ -0.01
CASP9P55211 C20orf181-201ENST00000623918 480 ntBASIC14.96□□□□□ -0.01
CASP9P55211 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.96□□□□□ -0.01
CASP9P55211 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.96□□□□□ -0.01
CASP9P55211 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CASP9P55211 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.96□□□□□ -0.01
CASP9P55211 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CASP9P55211 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CASP9P55211 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CASP9P55211 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CASP9P55211 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CASP9P55211 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CASP9P55211 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CASP9P55211 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms