Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 ARSEP1-201ENST00000420443 635 ntBASIC17.36■□□□□ 0.37
GPC3P51654 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.36■□□□□ 0.37
GPC3P51654 TMEM14DP-201ENST00000422205 345 ntBASIC17.36■□□□□ 0.37
GPC3P51654 AL442647.2-201ENST00000429864 857 ntBASIC17.36■□□□□ 0.37
GPC3P51654 GPR53P-205ENST00000457298 1084 ntBASIC17.36■□□□□ 0.37
GPC3P51654 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.36■□□□□ 0.37
GPC3P51654 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.36■□□□□ 0.37
GPC3P51654 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.36■□□□□ 0.37
GPC3P51654 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.36■□□□□ 0.37
GPC3P51654 BRI3BPP1-201ENST00000594224 787 ntBASIC17.36■□□□□ 0.37
GPC3P51654 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.36■□□□□ 0.37
GPC3P51654 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.36■□□□□ 0.37
GPC3P51654 AL162274.1-201ENST00000617191 1098 ntBASIC17.36■□□□□ 0.37
GPC3P51654 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
GPC3P51654 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GPC3P51654 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.36■□□□□ 0.37
GPC3P51654 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.36■□□□□ 0.37
GPC3P51654 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GPC3P51654 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
GPC3P51654 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GPC3P51654 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
GPC3P51654 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GPC3P51654 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.36■□□□□ 0.37
GPC3P51654 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.36■□□□□ 0.37
GPC3P51654 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GPC3P51654 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GPC3P51654 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.35■□□□□ 0.37
GPC3P51654 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
GPC3P51654 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC3P51654 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.35■□□□□ 0.37
GPC3P51654 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC3P51654 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC3P51654 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC3P51654 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.35■□□□□ 0.37
GPC3P51654 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.35■□□□□ 0.37
GPC3P51654 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
GPC3P51654 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC3P51654 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC3P51654 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC3P51654 AC079776.1-201ENST00000401540 1152 ntBASIC17.35■□□□□ 0.37
GPC3P51654 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.35■□□□□ 0.37
GPC3P51654 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.35■□□□□ 0.37
GPC3P51654 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.35■□□□□ 0.37
GPC3P51654 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GPC3P51654 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.35■□□□□ 0.37
GPC3P51654 HILS1-202ENST00000545329 423 ntBASIC17.35■□□□□ 0.37
GPC3P51654 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GPC3P51654 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.35■□□□□ 0.37
GPC3P51654 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.35■□□□□ 0.37
GPC3P51654 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC3P51654 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC3P51654 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
GPC3P51654 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GPC3P51654 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC3P51654 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GPC3P51654 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC3P51654 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.35■□□□□ 0.37
GPC3P51654 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC3P51654 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GPC3P51654 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.35■□□□□ 0.37
GPC3P51654 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
GPC3P51654 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GPC3P51654 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC3P51654 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC3P51654 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC3P51654 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC3P51654 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC3P51654 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC3P51654 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC3P51654 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC3P51654 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC3P51654 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
GPC3P51654 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GPC3P51654 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC3P51654 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GPC3P51654 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC3P51654 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC3P51654 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GPC3P51654 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
GPC3P51654 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC3P51654 AC007389.4-201ENST00000454674 793 ntBASIC17.34■□□□□ 0.37
GPC3P51654 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.34■□□□□ 0.37
GPC3P51654 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.34■□□□□ 0.37
GPC3P51654 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GPC3P51654 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.34■□□□□ 0.37
GPC3P51654 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
GPC3P51654 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.34■□□□□ 0.37
GPC3P51654 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.34■□□□□ 0.37
GPC3P51654 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.34■□□□□ 0.37
GPC3P51654 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.34■□□□□ 0.37
GPC3P51654 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.34■□□□□ 0.37
GPC3P51654 AC106886.1-201ENST00000568660 600 ntBASIC17.34■□□□□ 0.37
GPC3P51654 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.34■□□□□ 0.37
GPC3P51654 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.34■□□□□ 0.37
GPC3P51654 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.34■□□□□ 0.37
GPC3P51654 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.34■□□□□ 0.37
GPC3P51654 AL008721.1-201ENST00000609964 604 ntBASIC17.34■□□□□ 0.37
GPC3P51654 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GPC3P51654 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GPC3P51654 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms