Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A3P43003 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SLC1A3P43003 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A3P43003 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A3P43003 AC087481.3-201ENST00000602886 1894 ntBASIC14.55□□□□□ -0.08
SLC1A3P43003 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A3P43003 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A3P43003 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC1A3P43003 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A3P43003 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A3P43003 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A3P43003 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SLC1A3P43003 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.55□□□□□ -0.08
SLC1A3P43003 EEF1DP4-201ENST00000446006 880 ntBASIC14.55□□□□□ -0.08
SLC1A3P43003 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.55□□□□□ -0.08
SLC1A3P43003 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
SLC1A3P43003 AC105021.1-202ENST00000570572 669 ntBASIC14.55□□□□□ -0.08
SLC1A3P43003 AC003101.2-201ENST00000612557 442 ntBASIC14.55□□□□□ -0.08
SLC1A3P43003 AC007967.4-201ENST00000614700 386 ntBASIC14.55□□□□□ -0.08
SLC1A3P43003 AP001059.3-201ENST00000619053 235 ntBASIC14.55□□□□□ -0.08
SLC1A3P43003 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC1A3P43003 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC1A3P43003 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A3P43003 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.55□□□□□ -0.08
SLC1A3P43003 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC1A3P43003 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SLC1A3P43003 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.55□□□□□ -0.08
SLC1A3P43003 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC1A3P43003 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A3P43003 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.55□□□□□ -0.08
SLC1A3P43003 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A3P43003 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.55□□□□□ -0.08
SLC1A3P43003 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SLC1A3P43003 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A3P43003 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC1A3P43003 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A3P43003 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A3P43003 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A3P43003 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A3P43003 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SLC1A3P43003 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A3P43003 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A3P43003 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A3P43003 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A3P43003 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC1A3P43003 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A3P43003 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A3P43003 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A3P43003 SPDYE7P-202ENST00000420373 878 ntBASIC14.54□□□□□ -0.08
SLC1A3P43003 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.54□□□□□ -0.08
SLC1A3P43003 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC1A3P43003 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC1A3P43003 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC1A3P43003 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A3P43003 AL512356.2-201ENST00000546955 174 ntBASIC14.54□□□□□ -0.08
SLC1A3P43003 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A3P43003 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
SLC1A3P43003 AL596442.2-201ENST00000610240 980 ntBASIC14.54□□□□□ -0.08
SLC1A3P43003 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A3P43003 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A3P43003 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A3P43003 AL035456.1-201ENST00000456064 1369 ntBASIC14.54□□□□□ -0.08
SLC1A3P43003 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SLC1A3P43003 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.54□□□□□ -0.08
SLC1A3P43003 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A3P43003 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SLC1A3P43003 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
SLC1A3P43003 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A3P43003 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC1A3P43003 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A3P43003 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A3P43003 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SLC1A3P43003 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A3P43003 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.54□□□□□ -0.08
SLC1A3P43003 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.54□□□□□ -0.08
SLC1A3P43003 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A3P43003 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A3P43003 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
SLC1A3P43003 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SLC1A3P43003 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A3P43003 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SLC1A3P43003 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SLC1A3P43003 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC1A3P43003 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SLC1A3P43003 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 TCAF2P1-201ENST00000291129 2421 ntBASIC14.53□□□□□ -0.08
SLC1A3P43003 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC1A3P43003 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC1A3P43003 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms