Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT9P35527 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.31■□□□□ 0.36
KRT9P35527 CEND1P1-201ENST00000451006 455 ntBASIC17.31■□□□□ 0.36
KRT9P35527 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.31■□□□□ 0.36
KRT9P35527 AC079140.1-201ENST00000508039 487 ntBASIC17.31■□□□□ 0.36
KRT9P35527 IGHV3-62-201ENST00000520057 340 ntBASIC17.31■□□□□ 0.36
KRT9P35527 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.31■□□□□ 0.36
KRT9P35527 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.31■□□□□ 0.36
KRT9P35527 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.31■□□□□ 0.36
KRT9P35527 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.31■□□□□ 0.36
KRT9P35527 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.31■□□□□ 0.36
KRT9P35527 AC061975.2-201ENST00000581722 295 ntBASIC17.31■□□□□ 0.36
KRT9P35527 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.31■□□□□ 0.36
KRT9P35527 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.31■□□□□ 0.36
KRT9P35527 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.31■□□□□ 0.36
KRT9P35527 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
KRT9P35527 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT9P35527 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT9P35527 AL009178.2-201ENST00000597278 2719 ntBASIC17.31■□□□□ 0.36
KRT9P35527 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
KRT9P35527 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.31■□□□□ 0.36
KRT9P35527 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
KRT9P35527 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
KRT9P35527 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.31■□□□□ 0.36
KRT9P35527 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT9P35527 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT9P35527 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT9P35527 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT9P35527 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT9P35527 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
KRT9P35527 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT9P35527 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT9P35527 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT9P35527 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT9P35527 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
KRT9P35527 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT9P35527 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT9P35527 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
KRT9P35527 ELL2P1-201ENST00000413990 1906 ntBASIC17.3■□□□□ 0.36
KRT9P35527 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT9P35527 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT9P35527 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT9P35527 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT9P35527 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
KRT9P35527 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.3■□□□□ 0.36
KRT9P35527 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.3■□□□□ 0.36
KRT9P35527 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.3■□□□□ 0.36
KRT9P35527 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
KRT9P35527 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT9P35527 MIR3687-2-201ENST00000577708 61 ntBASIC17.3■□□□□ 0.36
KRT9P35527 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT9P35527 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT9P35527 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.3■□□□□ 0.36
KRT9P35527 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT9P35527 MIR3687-1-201ENST00000614492 61 ntBASIC17.3■□□□□ 0.36
KRT9P35527 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.3■□□□□ 0.36
KRT9P35527 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT9P35527 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT9P35527 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT9P35527 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
KRT9P35527 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.3■□□□□ 0.36
KRT9P35527 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT9P35527 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.3■□□□□ 0.36
KRT9P35527 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
KRT9P35527 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT9P35527 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT9P35527 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
KRT9P35527 AGAP7P-201ENST00000582299 2062 ntBASIC17.3■□□□□ 0.36
KRT9P35527 AGAP14-201ENST00000624701 2060 ntBASIC17.3■□□□□ 0.36
KRT9P35527 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT9P35527 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.3■□□□□ 0.36
KRT9P35527 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.3■□□□□ 0.36
KRT9P35527 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
KRT9P35527 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
KRT9P35527 KRT8P44-201ENST00000441609 1350 ntBASIC17.29■□□□□ 0.36
KRT9P35527 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT9P35527 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
KRT9P35527 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT9P35527 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT9P35527 AC126755.1-201ENST00000525846 6405 ntBASIC17.29■□□□□ 0.36
KRT9P35527 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT9P35527 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT9P35527 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT9P35527 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT9P35527 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT9P35527 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.29■□□□□ 0.36
KRT9P35527 SPCS2P4-201ENST00000436160 681 ntBASIC17.29■□□□□ 0.36
KRT9P35527 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
KRT9P35527 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.29■□□□□ 0.36
KRT9P35527 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.29■□□□□ 0.36
KRT9P35527 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.29■□□□□ 0.36
KRT9P35527 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.29■□□□□ 0.36
KRT9P35527 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.29■□□□□ 0.36
KRT9P35527 AC024267.1-201ENST00000582320 895 ntBASIC17.29■□□□□ 0.36
KRT9P35527 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT9P35527 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT9P35527 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.29■□□□□ 0.36
KRT9P35527 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT9P35527 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT9P35527 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms