Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC20.9■□□□□ 0.94
USP6P35125 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.9■□□□□ 0.94
USP6P35125 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP6P35125 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
USP6P35125 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.9■□□□□ 0.94
USP6P35125 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP6P35125 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
USP6P35125 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP6P35125 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP6P35125 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP6P35125 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC20.9■□□□□ 0.94
USP6P35125 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
USP6P35125 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP6P35125 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP6P35125 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP6P35125 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP6P35125 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC20.89■□□□□ 0.94
USP6P35125 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC20.89■□□□□ 0.94
USP6P35125 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC20.89■□□□□ 0.94
USP6P35125 ADM-202ENST00000524948 584 ntTSL 2 BASIC20.89■□□□□ 0.94
USP6P35125 AC105129.2-201ENST00000559536 390 ntBASIC20.89■□□□□ 0.94
USP6P35125 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
USP6P35125 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC20.89■□□□□ 0.94
USP6P35125 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
USP6P35125 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP6P35125 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP6P35125 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC20.89■□□□□ 0.93
USP6P35125 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP6P35125 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP6P35125 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
USP6P35125 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP6P35125 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP6P35125 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC20.89■□□□□ 0.93
USP6P35125 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
USP6P35125 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
USP6P35125 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC20.88■□□□□ 0.93
USP6P35125 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
USP6P35125 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
USP6P35125 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
USP6P35125 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC20.88■□□□□ 0.93
USP6P35125 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC20.88■□□□□ 0.93
USP6P35125 HIST2H2BB-201ENST00000449108 381 ntBASIC20.88■□□□□ 0.93
USP6P35125 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC20.88■□□□□ 0.93
USP6P35125 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC20.88■□□□□ 0.93
USP6P35125 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC20.88■□□□□ 0.93
USP6P35125 AC005730.2-201ENST00000564549 1184 ntBASIC20.88■□□□□ 0.93
USP6P35125 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC20.88■□□□□ 0.93
USP6P35125 NKG7-204ENST00000595217 816 ntTSL 2 BASIC20.88■□□□□ 0.93
USP6P35125 ZACNP1-201ENST00000612259 710 ntBASIC20.88■□□□□ 0.93
USP6P35125 ACE-203ENST00000413513 2237 ntTSL 2 BASIC20.88■□□□□ 0.93
USP6P35125 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC20.88■□□□□ 0.93
USP6P35125 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC20.88■□□□□ 0.93
USP6P35125 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP6P35125 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP6P35125 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
USP6P35125 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP6P35125 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP6P35125 ANKRD30BP2-201ENST00000435744 1610 ntBASIC20.88■□□□□ 0.93
USP6P35125 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP6P35125 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP6P35125 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
USP6P35125 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC20.88■□□□□ 0.93
USP6P35125 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP6P35125 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC20.88■□□□□ 0.93
USP6P35125 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP6P35125 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP6P35125 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
USP6P35125 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC20.87■□□□□ 0.93
USP6P35125 AC126915.1-201ENST00000522847 1038 ntBASIC20.87■□□□□ 0.93
USP6P35125 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
USP6P35125 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC20.87■□□□□ 0.93
USP6P35125 AL603764.1-201ENST00000636452 321 ntBASIC20.87■□□□□ 0.93
USP6P35125 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP6P35125 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.87■□□□□ 0.93
USP6P35125 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP6P35125 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP6P35125 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP6P35125 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP6P35125 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC20.87■□□□□ 0.93
USP6P35125 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP6P35125 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP6P35125 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP6P35125 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP6P35125 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC20.87■□□□□ 0.93
USP6P35125 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC20.87■□□□□ 0.93
USP6P35125 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP6P35125 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP6P35125 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.87■□□□□ 0.93
USP6P35125 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP6P35125 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
USP6P35125 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
USP6P35125 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP6P35125 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
USP6P35125 AC005077.2-201ENST00000449786 690 ntBASIC20.87■□□□□ 0.93
USP6P35125 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC20.87■□□□□ 0.93
USP6P35125 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC20.87■□□□□ 0.93
USP6P35125 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC20.87■□□□□ 0.93
USP6P35125 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USP6P35125 AC244157.2-201ENST00000616239 1006 ntBASIC20.87■□□□□ 0.93
USP6P35125 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms