Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTGFP29279 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CTGFP29279 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTGFP29279 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTGFP29279 AL136309.1-201ENST00000403917 691 ntBASIC17.41■□□□□ 0.38
CTGFP29279 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
CTGFP29279 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.41■□□□□ 0.38
CTGFP29279 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.41■□□□□ 0.38
CTGFP29279 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.41■□□□□ 0.38
CTGFP29279 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.41■□□□□ 0.38
CTGFP29279 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTGFP29279 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.41■□□□□ 0.38
CTGFP29279 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC17.41■□□□□ 0.38
CTGFP29279 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.41■□□□□ 0.38
CTGFP29279 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CTGFP29279 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CTGFP29279 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTGFP29279 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTGFP29279 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTGFP29279 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CTGFP29279 CLUHP2-201ENST00000426660 1303 ntBASIC17.41■□□□□ 0.38
CTGFP29279 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTGFP29279 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.41■□□□□ 0.38
CTGFP29279 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTGFP29279 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTGFP29279 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTGFP29279 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTGFP29279 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CTGFP29279 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTGFP29279 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CTGFP29279 AC011676.5-201ENST00000624864 2660 ntBASIC17.4■□□□□ 0.38
CTGFP29279 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTGFP29279 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTGFP29279 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTGFP29279 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CTGFP29279 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTGFP29279 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC17.4■□□□□ 0.38
CTGFP29279 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.4■□□□□ 0.38
CTGFP29279 AL627389.1-201ENST00000413508 1182 ntBASIC17.4■□□□□ 0.38
CTGFP29279 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTGFP29279 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC17.4■□□□□ 0.38
CTGFP29279 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC17.4■□□□□ 0.38
CTGFP29279 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.4■□□□□ 0.38
CTGFP29279 AC098935.1-201ENST00000446057 611 ntBASIC17.4■□□□□ 0.38
CTGFP29279 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.4■□□□□ 0.38
CTGFP29279 RN7SL181P-201ENST00000462921 277 ntBASIC17.4■□□□□ 0.38
CTGFP29279 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CTGFP29279 AC106794.1-201ENST00000506935 792 ntBASIC17.4■□□□□ 0.38
CTGFP29279 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC17.4■□□□□ 0.38
CTGFP29279 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTGFP29279 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.4■□□□□ 0.38
CTGFP29279 AL160314.3-201ENST00000556041 767 ntBASIC17.4■□□□□ 0.38
CTGFP29279 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC17.4■□□□□ 0.38
CTGFP29279 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTGFP29279 MIR4683-201ENST00000579659 81 ntBASIC17.4■□□□□ 0.38
CTGFP29279 RN7SL163P-201ENST00000583100 276 ntBASIC17.4■□□□□ 0.38
CTGFP29279 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTGFP29279 AC012044.1-201ENST00000603431 297 ntBASIC17.4■□□□□ 0.38
CTGFP29279 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.4■□□□□ 0.38
CTGFP29279 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTGFP29279 AL162426.1-201ENST00000624141 743 ntBASIC17.4■□□□□ 0.38
CTGFP29279 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.4■□□□□ 0.38
CTGFP29279 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTGFP29279 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC17.4■□□□□ 0.38
CTGFP29279 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTGFP29279 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTGFP29279 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CTGFP29279 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTGFP29279 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CTGFP29279 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CTGFP29279 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.39■□□□□ 0.38
CTGFP29279 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CTGFP29279 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTGFP29279 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTGFP29279 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTGFP29279 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTGFP29279 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CTGFP29279 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTGFP29279 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTGFP29279 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CTGFP29279 AL645937.2-201ENST00000396808 931 ntBASIC17.39■□□□□ 0.37
CTGFP29279 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.39■□□□□ 0.37
CTGFP29279 AC125604.1-201ENST00000496255 707 ntBASIC17.39■□□□□ 0.37
CTGFP29279 AC019193.1-201ENST00000506678 823 ntBASIC17.39■□□□□ 0.37
CTGFP29279 AC005324.6-201ENST00000587972 613 ntBASIC17.39■□□□□ 0.37
CTGFP29279 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTGFP29279 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.39■□□□□ 0.37
CTGFP29279 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTGFP29279 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.39■□□□□ 0.37
CTGFP29279 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTGFP29279 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CTGFP29279 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CTGFP29279 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.39■□□□□ 0.37
CTGFP29279 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CTGFP29279 AL157791.1-201ENST00000553667 1699 ntBASIC17.39■□□□□ 0.37
CTGFP29279 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CTGFP29279 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTGFP29279 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTGFP29279 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTGFP29279 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms