Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.17■□□□□ 0.34
RFX1P22670 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RFX1P22670 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
RFX1P22670 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.17■□□□□ 0.34
RFX1P22670 MIR4313-201ENST00000580760 101 ntBASIC17.17■□□□□ 0.34
RFX1P22670 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX1P22670 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.17■□□□□ 0.34
RFX1P22670 SPDYE12P-201ENST00000618416 771 ntBASIC17.17■□□□□ 0.34
RFX1P22670 MIR6799-201ENST00000620297 69 ntBASIC17.17■□□□□ 0.34
RFX1P22670 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX1P22670 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.17■□□□□ 0.34
RFX1P22670 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RFX1P22670 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RFX1P22670 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX1P22670 AC007541.1-201ENST00000570282 1469 ntBASIC17.17■□□□□ 0.34
RFX1P22670 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.17■□□□□ 0.34
RFX1P22670 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.17■□□□□ 0.34
RFX1P22670 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX1P22670 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.17■□□□□ 0.34
RFX1P22670 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX1P22670 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX1P22670 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.16■□□□□ 0.34
RFX1P22670 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFX1P22670 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.16■□□□□ 0.34
RFX1P22670 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX1P22670 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.16■□□□□ 0.34
RFX1P22670 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX1P22670 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RFX1P22670 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFX1P22670 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.16■□□□□ 0.34
RFX1P22670 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX1P22670 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX1P22670 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX1P22670 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX1P22670 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
RFX1P22670 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RFX1P22670 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.16■□□□□ 0.34
RFX1P22670 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.16■□□□□ 0.34
RFX1P22670 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.16■□□□□ 0.34
RFX1P22670 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.16■□□□□ 0.34
RFX1P22670 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.16■□□□□ 0.34
RFX1P22670 HILS1-202ENST00000545329 423 ntBASIC17.16■□□□□ 0.34
RFX1P22670 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.16■□□□□ 0.34
RFX1P22670 AC140912.1-201ENST00000577171 1054 ntBASIC17.16■□□□□ 0.34
RFX1P22670 AL132655.2-201ENST00000596276 594 ntBASIC17.16■□□□□ 0.34
RFX1P22670 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.16■□□□□ 0.34
RFX1P22670 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.16■□□□□ 0.34
RFX1P22670 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.16■□□□□ 0.34
RFX1P22670 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX1P22670 AC092850.2-201ENST00000623821 2697 ntBASIC17.16■□□□□ 0.34
RFX1P22670 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX1P22670 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RFX1P22670 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX1P22670 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RFX1P22670 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFX1P22670 PPT1-215ENST00000641471 2368 ntBASIC17.16■□□□□ 0.34
RFX1P22670 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.16■□□□□ 0.34
RFX1P22670 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RFX1P22670 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX1P22670 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.16■□□□□ 0.34
RFX1P22670 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX1P22670 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
RFX1P22670 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.16■□□□□ 0.34
RFX1P22670 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFX1P22670 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFX1P22670 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.16■□□□□ 0.34
RFX1P22670 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
RFX1P22670 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RFX1P22670 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
RFX1P22670 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.15■□□□□ 0.34
RFX1P22670 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFX1P22670 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX1P22670 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RFX1P22670 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFX1P22670 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX1P22670 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX1P22670 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX1P22670 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX1P22670 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.15■□□□□ 0.34
RFX1P22670 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.15■□□□□ 0.34
RFX1P22670 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.15■□□□□ 0.34
RFX1P22670 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFX1P22670 AC098614.1-201ENST00000368528 745 ntBASIC17.15■□□□□ 0.34
RFX1P22670 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.15■□□□□ 0.34
RFX1P22670 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.15■□□□□ 0.34
RFX1P22670 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.15■□□□□ 0.34
RFX1P22670 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.15■□□□□ 0.34
RFX1P22670 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFX1P22670 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.15■□□□□ 0.34
RFX1P22670 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFX1P22670 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.15■□□□□ 0.34
RFX1P22670 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.15■□□□□ 0.34
RFX1P22670 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.15■□□□□ 0.34
RFX1P22670 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.15■□□□□ 0.34
RFX1P22670 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.15■□□□□ 0.34
RFX1P22670 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.15■□□□□ 0.34
RFX1P22670 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.15■□□□□ 0.34
RFX1P22670 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.15■□□□□ 0.34
RFX1P22670 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFX1P22670 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms