Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
THRAP10827 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.9■□□□□ 0.14
THRAP10827 AC236430.1-201ENST00000402231 743 ntBASIC15.9■□□□□ 0.14
THRAP10827 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.9■□□□□ 0.14
THRAP10827 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.9■□□□□ 0.14
THRAP10827 AC092580.3-201ENST00000430932 139 ntBASIC15.9■□□□□ 0.14
THRAP10827 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
THRAP10827 UGT1A2P-201ENST00000454886 866 ntBASIC15.9■□□□□ 0.14
THRAP10827 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.9■□□□□ 0.14
THRAP10827 PRYP6-201ENST00000514804 343 ntBASIC15.9■□□□□ 0.14
THRAP10827 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.9■□□□□ 0.14
THRAP10827 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.9■□□□□ 0.14
THRAP10827 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.9■□□□□ 0.14
THRAP10827 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.9■□□□□ 0.14
THRAP10827 AC018529.1-201ENST00000613063 361 ntBASIC15.9■□□□□ 0.14
THRAP10827 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
THRAP10827 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.9■□□□□ 0.14
THRAP10827 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.9■□□□□ 0.14
THRAP10827 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.9■□□□□ 0.14
THRAP10827 AP3S2-216ENST00000617003 1561 ntBASIC15.9■□□□□ 0.14
THRAP10827 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.9■□□□□ 0.14
THRAP10827 AC020658.6-201ENST00000623564 1870 ntBASIC15.9■□□□□ 0.14
THRAP10827 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
THRAP10827 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
THRAP10827 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
THRAP10827 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.9■□□□□ 0.14
THRAP10827 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
THRAP10827 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
THRAP10827 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.9■□□□□ 0.14
THRAP10827 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
THRAP10827 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
THRAP10827 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
THRAP10827 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
THRAP10827 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
THRAP10827 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
THRAP10827 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
THRAP10827 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
THRAP10827 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
THRAP10827 TMBIM7P-203ENST00000641617 1718 ntBASIC15.89■□□□□ 0.13
THRAP10827 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
THRAP10827 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
THRAP10827 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
THRAP10827 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
THRAP10827 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
THRAP10827 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.89■□□□□ 0.13
THRAP10827 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.89■□□□□ 0.13
THRAP10827 AC002472.2-201ENST00000442739 958 ntBASIC15.89■□□□□ 0.13
THRAP10827 TSPY16P-201ENST00000449843 468 ntBASIC15.89■□□□□ 0.13
THRAP10827 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
THRAP10827 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
THRAP10827 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.89■□□□□ 0.13
THRAP10827 AC020765.3-201ENST00000613051 740 ntBASIC15.89■□□□□ 0.13
THRAP10827 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
THRAP10827 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.89■□□□□ 0.13
THRAP10827 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.89■□□□□ 0.13
THRAP10827 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
THRAP10827 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
THRAP10827 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.89■□□□□ 0.13
THRAP10827 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.89■□□□□ 0.13
THRAP10827 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
THRAP10827 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
THRAP10827 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
THRAP10827 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.89■□□□□ 0.13
THRAP10827 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
THRAP10827 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
THRAP10827 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
THRAP10827 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.89■□□□□ 0.13
THRAP10827 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
THRAP10827 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.89■□□□□ 0.13
THRAP10827 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
THRAP10827 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
THRAP10827 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
THRAP10827 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
THRAP10827 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.88■□□□□ 0.13
THRAP10827 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
THRAP10827 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.88■□□□□ 0.13
THRAP10827 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
THRAP10827 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
THRAP10827 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
THRAP10827 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
THRAP10827 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
THRAP10827 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.88■□□□□ 0.13
THRAP10827 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
THRAP10827 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.88■□□□□ 0.13
THRAP10827 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
THRAP10827 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.88■□□□□ 0.13
THRAP10827 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
THRAP10827 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
THRAP10827 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
THRAP10827 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
THRAP10827 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
THRAP10827 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
THRAP10827 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
THRAP10827 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
THRAP10827 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.88■□□□□ 0.13
THRAP10827 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.88■□□□□ 0.13
THRAP10827 TERF1P3-201ENST00000505638 1227 ntBASIC15.88■□□□□ 0.13
THRAP10827 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.88■□□□□ 0.13
THRAP10827 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
THRAP10827 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms