Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.35□□□□□ -0.43
CD28P10747 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.35□□□□□ -0.43
CD28P10747 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.35□□□□□ -0.43
CD28P10747 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.35□□□□□ -0.43
CD28P10747 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.35□□□□□ -0.43
CD28P10747 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.35□□□□□ -0.43
CD28P10747 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.35□□□□□ -0.43
CD28P10747 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.35□□□□□ -0.43
CD28P10747 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CD28P10747 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.35□□□□□ -0.43
CD28P10747 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CD28P10747 AC010319.3-201ENST00000597028 470 ntBASIC12.35□□□□□ -0.43
CD28P10747 AL512343.1-201ENST00000605837 169 ntBASIC12.35□□□□□ -0.43
CD28P10747 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.35□□□□□ -0.43
CD28P10747 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CD28P10747 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC12.35□□□□□ -0.43
CD28P10747 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CD28P10747 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.35□□□□□ -0.43
CD28P10747 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.35□□□□□ -0.43
CD28P10747 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CD28P10747 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
CD28P10747 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CD28P10747 ME2P1-201ENST00000426028 1970 ntBASIC12.34□□□□□ -0.43
CD28P10747 AC134407.2-201ENST00000625089 1978 ntBASIC12.34□□□□□ -0.43
CD28P10747 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
CD28P10747 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CD28P10747 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CD28P10747 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.34□□□□□ -0.43
CD28P10747 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CD28P10747 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CD28P10747 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CD28P10747 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
CD28P10747 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CD28P10747 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.34□□□□□ -0.43
CD28P10747 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CD28P10747 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 CES3-203ENST00000543856 3178 ntTSL 2 BASIC12.34□□□□□ -0.43
CD28P10747 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 HAUS4P1-201ENST00000406739 1145 ntBASIC12.34□□□□□ -0.43
CD28P10747 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 HLA-V-201ENST00000429037 534 ntBASIC12.34□□□□□ -0.43
CD28P10747 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.34□□□□□ -0.43
CD28P10747 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CD28P10747 AC022210.1-201ENST00000449856 793 ntBASIC12.34□□□□□ -0.43
CD28P10747 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.34□□□□□ -0.43
CD28P10747 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC12.34□□□□□ -0.43
CD28P10747 AC008735.3-201ENST00000596646 500 ntBASIC12.34□□□□□ -0.43
CD28P10747 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.34□□□□□ -0.43
CD28P10747 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.34□□□□□ -0.43
CD28P10747 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.34□□□□□ -0.43
CD28P10747 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 OS9-205ENST00000413095 1660 ntTSL 2 BASIC12.34□□□□□ -0.43
CD28P10747 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CD28P10747 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
CD28P10747 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
CD28P10747 AL161772.1-201ENST00000610494 4412 ntBASIC12.34□□□□□ -0.43
CD28P10747 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC12.34□□□□□ -0.43
CD28P10747 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
CD28P10747 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 DOC2GP-204ENST00000639052 2548 ntBASIC12.34□□□□□ -0.43
CD28P10747 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD28P10747 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CD28P10747 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CD28P10747 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CD28P10747 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
CD28P10747 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms