Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.95■□□□□ 0.62
APPP05067 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APPP05067 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.95■□□□□ 0.62
APPP05067 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
APPP05067 DOC2GP-202ENST00000514950 1163 ntBASIC18.95■□□□□ 0.62
APPP05067 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.95■□□□□ 0.62
APPP05067 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.95■□□□□ 0.62
APPP05067 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.95■□□□□ 0.62
APPP05067 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.95■□□□□ 0.62
APPP05067 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
APPP05067 AF228730.6-201ENST00000641497 218 ntBASIC18.95■□□□□ 0.62
APPP05067 AC084121.3-201ENST00000641716 218 ntBASIC18.95■□□□□ 0.62
APPP05067 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
APPP05067 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
APPP05067 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
APPP05067 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.95■□□□□ 0.62
APPP05067 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
APPP05067 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APPP05067 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APPP05067 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
APPP05067 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.95■□□□□ 0.62
APPP05067 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.95■□□□□ 0.62
APPP05067 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.95■□□□□ 0.62
APPP05067 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
APPP05067 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
APPP05067 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APPP05067 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
APPP05067 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.95■□□□□ 0.62
APPP05067 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC18.94■□□□□ 0.62
APPP05067 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APPP05067 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
APPP05067 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
APPP05067 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.94■□□□□ 0.62
APPP05067 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APPP05067 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.94■□□□□ 0.62
APPP05067 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
APPP05067 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.94■□□□□ 0.62
APPP05067 AL136379.1-201ENST00000623471 2642 ntBASIC18.94■□□□□ 0.62
APPP05067 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APPP05067 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APPP05067 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APPP05067 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
APPP05067 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
APPP05067 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APPP05067 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.94■□□□□ 0.62
APPP05067 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.94■□□□□ 0.62
APPP05067 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.94■□□□□ 0.62
APPP05067 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.94■□□□□ 0.62
APPP05067 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.94■□□□□ 0.62
APPP05067 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.94■□□□□ 0.62
APPP05067 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
APPP05067 SRD5A3P1-201ENST00000603021 949 ntBASIC18.94■□□□□ 0.62
APPP05067 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
APPP05067 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
APPP05067 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
APPP05067 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
APPP05067 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
APPP05067 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
APPP05067 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
APPP05067 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.94■□□□□ 0.62
APPP05067 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APPP05067 AL365209.1-201ENST00000624418 6473 ntBASIC18.94■□□□□ 0.62
APPP05067 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
APPP05067 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
APPP05067 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
APPP05067 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.94■□□□□ 0.62
APPP05067 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APPP05067 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
APPP05067 PAUPAR-201ENST00000630360 2965 ntBASIC18.93■□□□□ 0.62
APPP05067 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
APPP05067 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.93■□□□□ 0.62
APPP05067 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
APPP05067 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
APPP05067 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.93■□□□□ 0.62
APPP05067 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.93■□□□□ 0.62
APPP05067 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APPP05067 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
APPP05067 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
APPP05067 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.93■□□□□ 0.62
APPP05067 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APPP05067 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
APPP05067 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
APPP05067 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
APPP05067 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
APPP05067 SPTLC1P1-201ENST00000447199 261 ntBASIC18.93■□□□□ 0.62
APPP05067 AL589987.1-201ENST00000453380 819 ntBASIC18.93■□□□□ 0.62
APPP05067 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.93■□□□□ 0.62
APPP05067 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.93■□□□□ 0.62
APPP05067 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APPP05067 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
APPP05067 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
APPP05067 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
APPP05067 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.93■□□□□ 0.62
APPP05067 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
APPP05067 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
APPP05067 MIR4313-201ENST00000580760 101 ntBASIC18.93■□□□□ 0.62
APPP05067 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.93■□□□□ 0.62
APPP05067 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.93■□□□□ 0.62
APPP05067 AC097359.3-201ENST00000603982 1210 ntBASIC18.93■□□□□ 0.62
APPP05067 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms