Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MT-ND3P03897 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MT-ND3P03897 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.15■□□□□ 0.18
MT-ND3P03897 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MT-ND3P03897 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MT-ND3P03897 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.15■□□□□ 0.18
MT-ND3P03897 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.15■□□□□ 0.18
MT-ND3P03897 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MT-ND3P03897 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
MT-ND3P03897 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.15■□□□□ 0.18
MT-ND3P03897 KRT18P34-201ENST00000488218 1270 ntBASIC16.15■□□□□ 0.18
MT-ND3P03897 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.15■□□□□ 0.18
MT-ND3P03897 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.15■□□□□ 0.18
MT-ND3P03897 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MT-ND3P03897 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.15■□□□□ 0.18
MT-ND3P03897 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.15■□□□□ 0.18
MT-ND3P03897 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MT-ND3P03897 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MT-ND3P03897 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.15■□□□□ 0.18
MT-ND3P03897 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.15■□□□□ 0.18
MT-ND3P03897 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.15■□□□□ 0.18
MT-ND3P03897 AP001282.1-201ENST00000531301 1499 ntBASIC16.15■□□□□ 0.18
MT-ND3P03897 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.15■□□□□ 0.18
MT-ND3P03897 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.15■□□□□ 0.18
MT-ND3P03897 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MT-ND3P03897 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MT-ND3P03897 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.15■□□□□ 0.18
MT-ND3P03897 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MT-ND3P03897 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.15■□□□□ 0.18
MT-ND3P03897 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MT-ND3P03897 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
MT-ND3P03897 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.14■□□□□ 0.18
MT-ND3P03897 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.18
MT-ND3P03897 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
MT-ND3P03897 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
MT-ND3P03897 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND3P03897 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND3P03897 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND3P03897 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.14■□□□□ 0.17
MT-ND3P03897 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.14■□□□□ 0.17
MT-ND3P03897 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.14■□□□□ 0.17
MT-ND3P03897 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
MT-ND3P03897 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND3P03897 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.14■□□□□ 0.17
MT-ND3P03897 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND3P03897 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
MT-ND3P03897 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.14■□□□□ 0.17
MT-ND3P03897 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.14■□□□□ 0.17
MT-ND3P03897 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND3P03897 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
MT-ND3P03897 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND3P03897 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND3P03897 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
MT-ND3P03897 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
MT-ND3P03897 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND3P03897 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.14■□□□□ 0.17
MT-ND3P03897 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.14■□□□□ 0.17
MT-ND3P03897 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.14■□□□□ 0.17
MT-ND3P03897 FAM86C2P-203ENST00000528684 1004 ntBASIC16.14■□□□□ 0.17
MT-ND3P03897 RFPL4AP1-201ENST00000530883 850 ntBASIC16.14■□□□□ 0.17
MT-ND3P03897 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
MT-ND3P03897 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND3P03897 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.14■□□□□ 0.17
MT-ND3P03897 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.14■□□□□ 0.17
MT-ND3P03897 AC092902.6-201ENST00000641783 218 ntBASIC16.14■□□□□ 0.17
MT-ND3P03897 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.14■□□□□ 0.17
MT-ND3P03897 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
MT-ND3P03897 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND3P03897 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND3P03897 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.14■□□□□ 0.17
MT-ND3P03897 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
MT-ND3P03897 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND3P03897 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
MT-ND3P03897 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND3P03897 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND3P03897 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND3P03897 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND3P03897 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND3P03897 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND3P03897 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND3P03897 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.14■□□□□ 0.17
MT-ND3P03897 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
MT-ND3P03897 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.14■□□□□ 0.17
MT-ND3P03897 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND3P03897 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
MT-ND3P03897 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
MT-ND3P03897 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
MT-ND3P03897 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.14■□□□□ 0.17
MT-ND3P03897 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MT-ND3P03897 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
MT-ND3P03897 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms