Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT6AP02538 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
KRT6AP02538 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
KRT6AP02538 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
KRT6AP02538 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT6AP02538 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT6AP02538 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT6AP02538 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
KRT6AP02538 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT6AP02538 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.34■□□□□ 0.05
KRT6AP02538 AC005237.2-201ENST00000434368 219 ntBASIC15.34■□□□□ 0.05
KRT6AP02538 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.34■□□□□ 0.05
KRT6AP02538 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.34■□□□□ 0.05
KRT6AP02538 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
KRT6AP02538 DNAJB3-201ENST00000446806 729 ntBASIC15.34■□□□□ 0.05
KRT6AP02538 CEND1P1-201ENST00000451006 455 ntBASIC15.34■□□□□ 0.05
KRT6AP02538 ALG1L5P-201ENST00000482043 771 ntBASIC15.34■□□□□ 0.05
KRT6AP02538 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
KRT6AP02538 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
KRT6AP02538 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.34■□□□□ 0.05
KRT6AP02538 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.34■□□□□ 0.05
KRT6AP02538 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.34■□□□□ 0.05
KRT6AP02538 AC005829.1-201ENST00000570002 483 ntBASIC15.34■□□□□ 0.05
KRT6AP02538 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.34■□□□□ 0.05
KRT6AP02538 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
KRT6AP02538 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
KRT6AP02538 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.34■□□□□ 0.05
KRT6AP02538 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT6AP02538 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT6AP02538 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT6AP02538 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.34■□□□□ 0.05
KRT6AP02538 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
KRT6AP02538 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
KRT6AP02538 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT6AP02538 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT6AP02538 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
KRT6AP02538 AC006486.2-201ENST00000624246 2199 ntBASIC15.34■□□□□ 0.05
KRT6AP02538 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT6AP02538 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
KRT6AP02538 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.33■□□□□ 0.05
KRT6AP02538 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
KRT6AP02538 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
KRT6AP02538 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
KRT6AP02538 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.33■□□□□ 0.05
KRT6AP02538 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
KRT6AP02538 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
KRT6AP02538 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.33■□□□□ 0.05
KRT6AP02538 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.33■□□□□ 0.05
KRT6AP02538 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.33■□□□□ 0.05
KRT6AP02538 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
KRT6AP02538 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
KRT6AP02538 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.33■□□□□ 0.04
KRT6AP02538 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.33■□□□□ 0.04
KRT6AP02538 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.33■□□□□ 0.04
KRT6AP02538 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
KRT6AP02538 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KRT6AP02538 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT6AP02538 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.33■□□□□ 0.04
KRT6AP02538 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT6AP02538 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT6AP02538 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT6AP02538 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT6AP02538 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT6AP02538 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT6AP02538 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT6AP02538 AL353705.2-201ENST00000428243 662 ntBASIC15.33■□□□□ 0.04
KRT6AP02538 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT6AP02538 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.33■□□□□ 0.04
KRT6AP02538 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.33■□□□□ 0.04
KRT6AP02538 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KRT6AP02538 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
KRT6AP02538 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
KRT6AP02538 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
KRT6AP02538 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
KRT6AP02538 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT6AP02538 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT6AP02538 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT6AP02538 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.33■□□□□ 0.04
KRT6AP02538 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT6AP02538 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.33■□□□□ 0.04
KRT6AP02538 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT6AP02538 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT6AP02538 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KRT6AP02538 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT6AP02538 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT6AP02538 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.33■□□□□ 0.04
KRT6AP02538 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT6AP02538 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.33■□□□□ 0.04
KRT6AP02538 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
KRT6AP02538 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT6AP02538 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KRT6AP02538 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KRT6AP02538 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
KRT6AP02538 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT6AP02538 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
KRT6AP02538 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT6AP02538 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.32■□□□□ 0.04
KRT6AP02538 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT6AP02538 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT6AP02538 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms