Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFBP01127 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFBP01127 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFBP01127 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFBP01127 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PDGFBP01127 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.64■□□□□ 0.09
PDGFBP01127 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PDGFBP01127 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.63■□□□□ 0.09
PDGFBP01127 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.63■□□□□ 0.09
PDGFBP01127 LRRC59-203ENST00000576448 1531 ntBASIC15.63■□□□□ 0.09
PDGFBP01127 KRT8P29-201ENST00000420409 1371 ntBASIC15.63■□□□□ 0.09
PDGFBP01127 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.63■□□□□ 0.09
PDGFBP01127 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.63■□□□□ 0.09
PDGFBP01127 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
PDGFBP01127 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.63■□□□□ 0.09
PDGFBP01127 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFBP01127 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
PDGFBP01127 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFBP01127 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFBP01127 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFBP01127 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFBP01127 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFBP01127 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFBP01127 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFBP01127 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFBP01127 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.63■□□□□ 0.09
PDGFBP01127 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.63■□□□□ 0.09
PDGFBP01127 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFBP01127 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFBP01127 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.63■□□□□ 0.09
PDGFBP01127 RTN3P1-201ENST00000536295 711 ntBASIC15.63■□□□□ 0.09
PDGFBP01127 AC103691.2-201ENST00000618824 433 ntBASIC15.63■□□□□ 0.09
PDGFBP01127 PRSS30P-206ENST00000641773 873 ntBASIC15.63■□□□□ 0.09
PDGFBP01127 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFBP01127 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFBP01127 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.63■□□□□ 0.09
PDGFBP01127 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFBP01127 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PDGFBP01127 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PDGFBP01127 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFBP01127 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.63■□□□□ 0.09
PDGFBP01127 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFBP01127 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFBP01127 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.63■□□□□ 0.09
PDGFBP01127 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
PDGFBP01127 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFBP01127 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFBP01127 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.63■□□□□ 0.09
PDGFBP01127 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
PDGFBP01127 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDGFBP01127 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
PDGFBP01127 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PDGFBP01127 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFBP01127 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
PDGFBP01127 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFBP01127 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PDGFBP01127 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PDGFBP01127 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFBP01127 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFBP01127 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PDGFBP01127 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PDGFBP01127 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.62■□□□□ 0.09
PDGFBP01127 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFBP01127 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PDGFBP01127 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFBP01127 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFBP01127 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFBP01127 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFBP01127 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFBP01127 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.62■□□□□ 0.09
PDGFBP01127 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFBP01127 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFBP01127 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFBP01127 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.62■□□□□ 0.09
PDGFBP01127 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFBP01127 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PDGFBP01127 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFBP01127 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.62■□□□□ 0.09
PDGFBP01127 AC106794.1-201ENST00000506935 792 ntBASIC15.62■□□□□ 0.09
PDGFBP01127 AL391280.1-201ENST00000506969 1062 ntBASIC15.62■□□□□ 0.09
PDGFBP01127 AC092171.5-201ENST00000608012 942 ntBASIC15.62■□□□□ 0.09
PDGFBP01127 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.62■□□□□ 0.09
PDGFBP01127 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFBP01127 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFBP01127 LTB4R2-202ENST00000528054 3092 ntBASIC15.62■□□□□ 0.09
PDGFBP01127 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.62■□□□□ 0.09
PDGFBP01127 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFBP01127 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.62■□□□□ 0.09
PDGFBP01127 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
PDGFBP01127 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
PDGFBP01127 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.62■□□□□ 0.09
PDGFBP01127 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFBP01127 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFBP01127 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFBP01127 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
PDGFBP01127 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PDGFBP01127 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.62■□□□□ 0.09
PDGFBP01127 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDGFBP01127 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDGFBP01127 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms