Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CTDNEP1O95476 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.2■□□□□ 0.5
CTDNEP1O95476 ZNF890P-202ENST00000530367 1156 ntBASIC18.2■□□□□ 0.5
CTDNEP1O95476 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTDNEP1O95476 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.2■□□□□ 0.5
CTDNEP1O95476 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CTDNEP1O95476 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.2■□□□□ 0.5
CTDNEP1O95476 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.2■□□□□ 0.5
CTDNEP1O95476 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.2■□□□□ 0.5
CTDNEP1O95476 AC015910.1-201ENST00000579400 975 ntBASIC18.2■□□□□ 0.5
CTDNEP1O95476 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.2■□□□□ 0.5
CTDNEP1O95476 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.2■□□□□ 0.5
CTDNEP1O95476 AC074044.1-201ENST00000609673 707 ntBASIC18.2■□□□□ 0.5
CTDNEP1O95476 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.2■□□□□ 0.5
CTDNEP1O95476 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTDNEP1O95476 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTDNEP1O95476 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTDNEP1O95476 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.2■□□□□ 0.5
CTDNEP1O95476 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTDNEP1O95476 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.2■□□□□ 0.5
CTDNEP1O95476 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTDNEP1O95476 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.2■□□□□ 0.5
CTDNEP1O95476 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTDNEP1O95476 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTDNEP1O95476 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTDNEP1O95476 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTDNEP1O95476 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CTDNEP1O95476 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CTDNEP1O95476 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CTDNEP1O95476 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTDNEP1O95476 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTDNEP1O95476 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.19■□□□□ 0.5
CTDNEP1O95476 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTDNEP1O95476 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.19■□□□□ 0.5
CTDNEP1O95476 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CTDNEP1O95476 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTDNEP1O95476 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTDNEP1O95476 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CTDNEP1O95476 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CTDNEP1O95476 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTDNEP1O95476 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.19■□□□□ 0.5
CTDNEP1O95476 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTDNEP1O95476 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTDNEP1O95476 TOMM22P5-201ENST00000416399 439 ntBASIC18.19■□□□□ 0.5
CTDNEP1O95476 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.19■□□□□ 0.5
CTDNEP1O95476 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CTDNEP1O95476 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTDNEP1O95476 FAM86GP-201ENST00000448322 971 ntBASIC18.19■□□□□ 0.5
CTDNEP1O95476 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.19■□□□□ 0.5
CTDNEP1O95476 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
CTDNEP1O95476 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTDNEP1O95476 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.19■□□□□ 0.5
CTDNEP1O95476 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTDNEP1O95476 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTDNEP1O95476 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTDNEP1O95476 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.19■□□□□ 0.5
CTDNEP1O95476 CICP24-201ENST00000605464 2705 ntBASIC18.19■□□□□ 0.5
CTDNEP1O95476 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTDNEP1O95476 AP002414.2-201ENST00000591780 3365 ntBASIC18.19■□□□□ 0.5
CTDNEP1O95476 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.19■□□□□ 0.5
CTDNEP1O95476 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.19■□□□□ 0.5
CTDNEP1O95476 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.19■□□□□ 0.5
CTDNEP1O95476 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CTDNEP1O95476 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDNEP1O95476 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CTDNEP1O95476 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.18■□□□□ 0.5
CTDNEP1O95476 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDNEP1O95476 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CTDNEP1O95476 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CTDNEP1O95476 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
CTDNEP1O95476 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CTDNEP1O95476 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CTDNEP1O95476 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.18■□□□□ 0.5
CTDNEP1O95476 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CTDNEP1O95476 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CTDNEP1O95476 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.18■□□□□ 0.5
CTDNEP1O95476 AC067863.1-201ENST00000494933 530 ntBASIC18.18■□□□□ 0.5
CTDNEP1O95476 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.18■□□□□ 0.5
CTDNEP1O95476 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.18■□□□□ 0.5
CTDNEP1O95476 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.18■□□□□ 0.5
CTDNEP1O95476 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
CTDNEP1O95476 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CTDNEP1O95476 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDNEP1O95476 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.18■□□□□ 0.5
CTDNEP1O95476 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CTDNEP1O95476 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDNEP1O95476 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.18■□□□□ 0.5
CTDNEP1O95476 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDNEP1O95476 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.18■□□□□ 0.5
CTDNEP1O95476 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDNEP1O95476 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDNEP1O95476 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTDNEP1O95476 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDNEP1O95476 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.18■□□□□ 0.5
CTDNEP1O95476 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTDNEP1O95476 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDNEP1O95476 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDNEP1O95476 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDNEP1O95476 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTDNEP1O95476 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms