Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LTN1O94822 RPS15-205ENST00000586686 562 ntTSL 5 BASIC20.41■□□□□ 0.86
LTN1O94822 RPS15-208ENST00000591804 711 ntTSL 5 BASIC20.41■□□□□ 0.86
LTN1O94822 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LTN1O94822 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
LTN1O94822 AC007663.3-201ENST00000609632 465 ntBASIC20.41■□□□□ 0.86
LTN1O94822 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.41■□□□□ 0.86
LTN1O94822 ANKRD30BP2-201ENST00000435744 1610 ntBASIC20.41■□□□□ 0.86
LTN1O94822 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.41■□□□□ 0.86
LTN1O94822 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LTN1O94822 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LTN1O94822 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.41■□□□□ 0.86
LTN1O94822 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LTN1O94822 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LTN1O94822 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LTN1O94822 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
LTN1O94822 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LTN1O94822 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LTN1O94822 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LTN1O94822 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LTN1O94822 KRT8P4-201ENST00000509735 1454 ntBASIC20.41■□□□□ 0.86
LTN1O94822 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LTN1O94822 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC20.41■□□□□ 0.86
LTN1O94822 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
LTN1O94822 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LTN1O94822 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LTN1O94822 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC20.41■□□□□ 0.86
LTN1O94822 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC20.41■□□□□ 0.86
LTN1O94822 AC026740.1-201ENST00000607068 791 ntBASIC20.41■□□□□ 0.86
LTN1O94822 AC244157.2-201ENST00000616239 1006 ntBASIC20.41■□□□□ 0.86
LTN1O94822 AC022748.3-201ENST00000621828 275 ntBASIC20.41■□□□□ 0.86
LTN1O94822 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.41■□□□□ 0.86
LTN1O94822 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LTN1O94822 SUPT20HL2-201ENST00000486479 2409 ntBASIC20.41■□□□□ 0.86
LTN1O94822 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LTN1O94822 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LTN1O94822 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
LTN1O94822 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LTN1O94822 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LTN1O94822 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC20.4■□□□□ 0.86
LTN1O94822 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LTN1O94822 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LTN1O94822 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC20.4■□□□□ 0.86
LTN1O94822 FTLP10-202ENST00000505798 471 ntBASIC20.4■□□□□ 0.86
LTN1O94822 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC20.4■□□□□ 0.86
LTN1O94822 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
LTN1O94822 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC20.4■□□□□ 0.86
LTN1O94822 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
LTN1O94822 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LTN1O94822 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC20.4■□□□□ 0.86
LTN1O94822 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
LTN1O94822 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LTN1O94822 RPL5P21-201ENST00000404620 815 ntBASIC20.39■□□□□ 0.86
LTN1O94822 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
LTN1O94822 ACTG1P2-201ENST00000415776 1125 ntBASIC20.39■□□□□ 0.86
LTN1O94822 HINT2P1-201ENST00000419438 481 ntBASIC20.39■□□□□ 0.86
LTN1O94822 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LTN1O94822 ACTG1P11-201ENST00000425411 1125 ntBASIC20.39■□□□□ 0.86
LTN1O94822 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LTN1O94822 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC20.39■□□□□ 0.86
LTN1O94822 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC20.39■□□□□ 0.86
LTN1O94822 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC20.39■□□□□ 0.86
LTN1O94822 MIR4683-201ENST00000579659 81 ntBASIC20.39■□□□□ 0.86
LTN1O94822 AL358472.3-201ENST00000608147 415 ntBASIC20.39■□□□□ 0.86
LTN1O94822 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LTN1O94822 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LTN1O94822 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LTN1O94822 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LTN1O94822 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LTN1O94822 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LTN1O94822 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LTN1O94822 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LTN1O94822 AC008132.1-202ENST00000342005 1389 ntBASIC20.39■□□□□ 0.85
LTN1O94822 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LTN1O94822 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
LTN1O94822 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC20.39■□□□□ 0.85
LTN1O94822 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC20.39■□□□□ 0.85
LTN1O94822 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
LTN1O94822 AL662890.1-201ENST00000396818 632 ntBASIC20.39■□□□□ 0.85
LTN1O94822 CYP46A4P-201ENST00000414953 267 ntBASIC20.39■□□□□ 0.85
LTN1O94822 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC20.39■□□□□ 0.85
LTN1O94822 FNTAP2-201ENST00000430308 634 ntBASIC20.39■□□□□ 0.85
LTN1O94822 CHMP1AP1-201ENST00000445563 662 ntBASIC20.39■□□□□ 0.85
LTN1O94822 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LTN1O94822 COG4-212ENST00000564653 590 ntTSL 5 BASIC20.39■□□□□ 0.85
LTN1O94822 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC20.39■□□□□ 0.85
LTN1O94822 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LTN1O94822 KLK3-207ENST00000595952 969 ntTSL 3 BASIC20.39■□□□□ 0.85
LTN1O94822 AC016629.1-201ENST00000596579 586 ntBASIC20.39■□□□□ 0.85
LTN1O94822 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
LTN1O94822 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC20.38■□□□□ 0.85
LTN1O94822 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LTN1O94822 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LTN1O94822 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LTN1O94822 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LTN1O94822 PCDH8P1-201ENST00000428983 2773 ntBASIC20.38■□□□□ 0.85
LTN1O94822 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LTN1O94822 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
LTN1O94822 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LTN1O94822 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms