Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AC098850.1-201ENST00000419919 790 ntBASIC15.92■□□□□ 0.14
KDELR3O43731 COX20P2-201ENST00000452636 358 ntBASIC15.92■□□□□ 0.14
KDELR3O43731 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
KDELR3O43731 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.92■□□□□ 0.14
KDELR3O43731 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.92■□□□□ 0.14
KDELR3O43731 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
KDELR3O43731 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
KDELR3O43731 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.92■□□□□ 0.14
KDELR3O43731 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.92■□□□□ 0.14
KDELR3O43731 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.92■□□□□ 0.14
KDELR3O43731 AC027307.3-201ENST00000594262 1100 ntBASIC15.92■□□□□ 0.14
KDELR3O43731 TMEM261P1-201ENST00000604899 340 ntBASIC15.92■□□□□ 0.14
KDELR3O43731 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.92■□□□□ 0.14
KDELR3O43731 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.92■□□□□ 0.14
KDELR3O43731 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
KDELR3O43731 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
KDELR3O43731 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
KDELR3O43731 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
KDELR3O43731 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
KDELR3O43731 PAUPAR-201ENST00000630360 2965 ntBASIC15.92■□□□□ 0.14
KDELR3O43731 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
KDELR3O43731 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.92■□□□□ 0.14
KDELR3O43731 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.92■□□□□ 0.14
KDELR3O43731 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KDELR3O43731 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.91■□□□□ 0.14
KDELR3O43731 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.91■□□□□ 0.14
KDELR3O43731 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.91■□□□□ 0.14
KDELR3O43731 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
KDELR3O43731 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KDELR3O43731 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
KDELR3O43731 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
KDELR3O43731 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.91■□□□□ 0.14
KDELR3O43731 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KDELR3O43731 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
KDELR3O43731 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
KDELR3O43731 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KDELR3O43731 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
KDELR3O43731 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KDELR3O43731 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
KDELR3O43731 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.91■□□□□ 0.14
KDELR3O43731 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.91■□□□□ 0.14
KDELR3O43731 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.91■□□□□ 0.14
KDELR3O43731 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.91■□□□□ 0.14
KDELR3O43731 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.91■□□□□ 0.14
KDELR3O43731 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.91■□□□□ 0.14
KDELR3O43731 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.91■□□□□ 0.14
KDELR3O43731 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.91■□□□□ 0.14
KDELR3O43731 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
KDELR3O43731 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
KDELR3O43731 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
KDELR3O43731 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
KDELR3O43731 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
KDELR3O43731 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
KDELR3O43731 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KDELR3O43731 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
KDELR3O43731 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KDELR3O43731 AC084364.1-201ENST00000551967 1556 ntBASIC15.91■□□□□ 0.14
KDELR3O43731 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
KDELR3O43731 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.91■□□□□ 0.14
KDELR3O43731 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.91■□□□□ 0.14
KDELR3O43731 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KDELR3O43731 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KDELR3O43731 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
KDELR3O43731 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
KDELR3O43731 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.91■□□□□ 0.14
KDELR3O43731 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.9■□□□□ 0.14
KDELR3O43731 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.9■□□□□ 0.14
KDELR3O43731 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KDELR3O43731 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
KDELR3O43731 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KDELR3O43731 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
KDELR3O43731 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
KDELR3O43731 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KDELR3O43731 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.9■□□□□ 0.14
KDELR3O43731 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
KDELR3O43731 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KDELR3O43731 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.9■□□□□ 0.14
KDELR3O43731 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KDELR3O43731 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KDELR3O43731 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
KDELR3O43731 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KDELR3O43731 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.9■□□□□ 0.14
KDELR3O43731 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
KDELR3O43731 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.9■□□□□ 0.14
KDELR3O43731 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KDELR3O43731 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.9■□□□□ 0.14
KDELR3O43731 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KDELR3O43731 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KDELR3O43731 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
KDELR3O43731 AC092552.1-201ENST00000547243 906 ntBASIC15.9■□□□□ 0.14
KDELR3O43731 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.9■□□□□ 0.14
KDELR3O43731 BRI3BPP1-201ENST00000594224 787 ntBASIC15.9■□□□□ 0.14
KDELR3O43731 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.9■□□□□ 0.14
KDELR3O43731 AC025048.6-201ENST00000634326 1161 ntBASIC15.9■□□□□ 0.14
KDELR3O43731 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.9■□□□□ 0.14
KDELR3O43731 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.9■□□□□ 0.14
KDELR3O43731 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
KDELR3O43731 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
KDELR3O43731 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.9■□□□□ 0.14
KDELR3O43731 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms