Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM38O00635 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM38O00635 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
TRIM38O00635 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
TRIM38O00635 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM38O00635 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM38O00635 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM38O00635 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM38O00635 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM38O00635 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.92■□□□□ 0.14
TRIM38O00635 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM38O00635 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.92■□□□□ 0.14
TRIM38O00635 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
TRIM38O00635 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM38O00635 AC112504.1-201ENST00000623415 1841 ntBASIC15.92■□□□□ 0.14
TRIM38O00635 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM38O00635 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM38O00635 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM38O00635 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.92■□□□□ 0.14
TRIM38O00635 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM38O00635 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.92■□□□□ 0.14
TRIM38O00635 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM38O00635 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TRIM38O00635 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM38O00635 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM38O00635 DGCR5-201ENST00000399539 862 ntBASIC15.92■□□□□ 0.14
TRIM38O00635 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.92■□□□□ 0.14
TRIM38O00635 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.92■□□□□ 0.14
TRIM38O00635 U91328.1-201ENST00000437528 223 ntBASIC15.92■□□□□ 0.14
TRIM38O00635 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRIM38O00635 RN7SL618P-201ENST00000477850 296 ntBASIC15.92■□□□□ 0.14
TRIM38O00635 AC004790.1-201ENST00000612686 536 ntBASIC15.92■□□□□ 0.14
TRIM38O00635 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.92■□□□□ 0.14
TRIM38O00635 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.92■□□□□ 0.14
TRIM38O00635 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM38O00635 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.92■□□□□ 0.14
TRIM38O00635 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.92■□□□□ 0.14
TRIM38O00635 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.92■□□□□ 0.14
TRIM38O00635 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM38O00635 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.92■□□□□ 0.14
TRIM38O00635 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
TRIM38O00635 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM38O00635 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM38O00635 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TRIM38O00635 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM38O00635 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TRIM38O00635 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.91■□□□□ 0.14
TRIM38O00635 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TRIM38O00635 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TRIM38O00635 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.91■□□□□ 0.14
TRIM38O00635 BTBD7P1-201ENST00000447253 1453 ntBASIC15.91■□□□□ 0.14
TRIM38O00635 AL512652.2-201ENST00000625156 1716 ntBASIC15.91■□□□□ 0.14
TRIM38O00635 TNRC18P2-201ENST00000417666 2714 ntBASIC15.91■□□□□ 0.14
TRIM38O00635 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM38O00635 LINC02447-202ENST00000501888 2146 ntBASIC15.91■□□□□ 0.14
TRIM38O00635 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM38O00635 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM38O00635 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.91■□□□□ 0.14
TRIM38O00635 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.91■□□□□ 0.14
TRIM38O00635 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
TRIM38O00635 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM38O00635 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM38O00635 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM38O00635 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM38O00635 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM38O00635 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM38O00635 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.91■□□□□ 0.14
TRIM38O00635 AC093724.1-201ENST00000448659 1027 ntBASIC15.91■□□□□ 0.14
TRIM38O00635 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.91■□□□□ 0.14
TRIM38O00635 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.91■□□□□ 0.14
TRIM38O00635 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.91■□□□□ 0.14
TRIM38O00635 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.91■□□□□ 0.14
TRIM38O00635 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.91■□□□□ 0.14
TRIM38O00635 AC044860.1-202ENST00000559481 777 ntBASIC15.91■□□□□ 0.14
TRIM38O00635 AC010336.2-201ENST00000564226 506 ntBASIC15.91■□□□□ 0.14
TRIM38O00635 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.91■□□□□ 0.14
TRIM38O00635 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.91■□□□□ 0.14
TRIM38O00635 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM38O00635 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM38O00635 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRIM38O00635 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRIM38O00635 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM38O00635 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TRIM38O00635 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM38O00635 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM38O00635 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM38O00635 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM38O00635 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.91■□□□□ 0.14
TRIM38O00635 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.91■□□□□ 0.14
TRIM38O00635 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.91■□□□□ 0.14
TRIM38O00635 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM38O00635 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM38O00635 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.91■□□□□ 0.14
TRIM38O00635 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRIM38O00635 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM38O00635 LINC02228-204ENST00000642115 2962 ntBASIC15.9■□□□□ 0.14
TRIM38O00635 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM38O00635 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM38O00635 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRIM38O00635 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 224.2 ms