Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM4A7MD48 SPDYE17-201ENST00000412399 783 ntBASIC12.72□□□□□ -0.37
SRRM4A7MD48 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.72□□□□□ -0.37
SRRM4A7MD48 AC211486.1-202ENST00000416371 468 ntBASIC12.72□□□□□ -0.37
SRRM4A7MD48 AC136604.1-201ENST00000418535 575 ntBASIC12.72□□□□□ -0.37
SRRM4A7MD48 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.72□□□□□ -0.37
SRRM4A7MD48 HIST3H2BA-201ENST00000436555 524 ntBASIC12.72□□□□□ -0.37
SRRM4A7MD48 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.72□□□□□ -0.37
SRRM4A7MD48 AC211476.1-201ENST00000503899 468 ntBASIC12.72□□□□□ -0.37
SRRM4A7MD48 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.72□□□□□ -0.37
SRRM4A7MD48 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SRRM4A7MD48 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.72□□□□□ -0.37
SRRM4A7MD48 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.72□□□□□ -0.37
SRRM4A7MD48 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.72□□□□□ -0.37
SRRM4A7MD48 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.72□□□□□ -0.37
SRRM4A7MD48 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.72□□□□□ -0.37
SRRM4A7MD48 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.72□□□□□ -0.37
SRRM4A7MD48 RN7SL828P-201ENST00000607615 303 ntBASIC12.72□□□□□ -0.37
SRRM4A7MD48 AC009093.7-201ENST00000623853 1223 ntBASIC12.72□□□□□ -0.37
SRRM4A7MD48 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.72□□□□□ -0.37
SRRM4A7MD48 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SRRM4A7MD48 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.72□□□□□ -0.37
SRRM4A7MD48 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SRRM4A7MD48 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM4A7MD48 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
SRRM4A7MD48 AC099063.4-201ENST00000641099 1602 ntBASIC12.72□□□□□ -0.37
SRRM4A7MD48 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM4A7MD48 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM4A7MD48 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.72□□□□□ -0.37
SRRM4A7MD48 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.72□□□□□ -0.37
SRRM4A7MD48 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SRRM4A7MD48 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM4A7MD48 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SRRM4A7MD48 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM4A7MD48 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SRRM4A7MD48 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM4A7MD48 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.72□□□□□ -0.37
SRRM4A7MD48 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SRRM4A7MD48 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.71□□□□□ -0.37
SRRM4A7MD48 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.71□□□□□ -0.37
SRRM4A7MD48 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM4A7MD48 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
SRRM4A7MD48 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM4A7MD48 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SRRM4A7MD48 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.71□□□□□ -0.37
SRRM4A7MD48 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM4A7MD48 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
SRRM4A7MD48 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.71□□□□□ -0.37
SRRM4A7MD48 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.71□□□□□ -0.37
SRRM4A7MD48 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM4A7MD48 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.71□□□□□ -0.37
SRRM4A7MD48 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM4A7MD48 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SRRM4A7MD48 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM4A7MD48 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM4A7MD48 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
SRRM4A7MD48 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.71□□□□□ -0.37
SRRM4A7MD48 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.71□□□□□ -0.37
SRRM4A7MD48 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM4A7MD48 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.71□□□□□ -0.37
SRRM4A7MD48 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
SRRM4A7MD48 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.71□□□□□ -0.37
SRRM4A7MD48 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.71□□□□□ -0.37
SRRM4A7MD48 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.71□□□□□ -0.37
SRRM4A7MD48 AC023141.5-201ENST00000458585 616 ntBASIC12.71□□□□□ -0.37
SRRM4A7MD48 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.71□□□□□ -0.37
SRRM4A7MD48 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.71□□□□□ -0.37
SRRM4A7MD48 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.71□□□□□ -0.37
SRRM4A7MD48 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.71□□□□□ -0.37
SRRM4A7MD48 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM4A7MD48 MIR4453-201ENST00000584019 89 ntBASIC12.71□□□□□ -0.37
SRRM4A7MD48 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.71□□□□□ -0.37
SRRM4A7MD48 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.71□□□□□ -0.37
SRRM4A7MD48 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM4A7MD48 AC007967.4-201ENST00000614700 386 ntBASIC12.71□□□□□ -0.37
SRRM4A7MD48 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM4A7MD48 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM4A7MD48 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM4A7MD48 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SRRM4A7MD48 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.71□□□□□ -0.38
SRRM4A7MD48 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
SRRM4A7MD48 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
SRRM4A7MD48 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.71□□□□□ -0.38
SRRM4A7MD48 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SRRM4A7MD48 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SRRM4A7MD48 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SRRM4A7MD48 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.71□□□□□ -0.38
SRRM4A7MD48 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
SRRM4A7MD48 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SRRM4A7MD48 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.71□□□□□ -0.38
SRRM4A7MD48 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.7□□□□□ -0.38
SRRM4A7MD48 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SRRM4A7MD48 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SRRM4A7MD48 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.7□□□□□ -0.38
SRRM4A7MD48 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.7□□□□□ -0.38
SRRM4A7MD48 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SRRM4A7MD48 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SRRM4A7MD48 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.7□□□□□ -0.38
SRRM4A7MD48 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SRRM4A7MD48 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms