Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 CICP13-201ENST00000422015 2789 ntBASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 AC004987.2-201ENST00000395959 1148 ntBASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 RPSAP43-201ENST00000402237 625 ntBASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 AC004461.1-201ENST00000412461 403 ntBASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 RPP21-221ENST00000428040 594 ntTSL 2 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 YBX1P5-201ENST00000509441 847 ntBASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 AP000344.2-201ENST00000512987 629 ntBASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 AL139384.1-201ENST00000612143 3047 ntBASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
TRGV1A0A0A0MS02 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 BNIP3P1-202ENST00000550043 1585 ntBASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 STOM-202ENST00000347359 870 ntTSL 2 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 AL627223.1-201ENST00000416693 442 ntBASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 RBPMS2P1-201ENST00000437762 623 ntBASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 ELP6-209ENST00000446787 894 ntTSL 3 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 ALG1L8P-201ENST00000533887 760 ntBASIC11.5□□□□□ -0.57
TRGV1A0A0A0MS02 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms