Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL4A3BPQ9Y5P4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.64■□□□□ 0.42
COL4A3BPQ9Y5P4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 DOC2GP-202ENST00000514950 1163 ntBASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 AC074044.1-201ENST00000609673 707 ntBASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 AL662799.1-202ENST00000614205 422 ntBASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL4A3BPQ9Y5P4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 AC007541.1-201ENST00000570282 1469 ntBASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 SPDYE19P-201ENST00000338590 713 ntBASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 MIR4313-201ENST00000580760 101 ntBASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 SRD5A3P1-201ENST00000603021 949 ntBASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
COL4A3BPQ9Y5P4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL4A3BPQ9Y5P4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms