Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
RCL1Q9Y2P8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 AC041040.2-201ENST00000622926 2899 ntBASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 MTDHP4-201ENST00000600287 670 ntBASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RCL1Q9Y2P8 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 WASH6P-202ENST00000359512 1437 ntBASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 LINC01230-201ENST00000625222 3017 ntBASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 KRT16P4-201ENST00000453883 522 ntBASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 AP002469.2-201ENST00000531724 424 ntBASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 AL031055.1-201ENST00000606362 631 ntBASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RCL1Q9Y2P8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms