Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AP006294.1-201ENST00000415407 339 ntBASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 AC114501.2-201ENST00000439631 535 ntBASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 CHCHD2P3-201ENST00000603038 451 ntBASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 AC004790.1-201ENST00000612686 536 ntBASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 AL109936.8-201ENST00000641772 604 ntBASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPA1Q9UND3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 RN7SL752P-201ENST00000463779 287 ntBASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 MEIS3P1-201ENST00000495167 958 ntBASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 TPRX2P-201ENST00000535362 881 ntBASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 SRD5A3P1-201ENST00000603021 949 ntBASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 AC007431.3-201ENST00000623221 587 ntBASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 AC004461.2-201ENST00000629517 803 ntBASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 AL603832.2-201ENST00000566195 2125 ntBASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPA1Q9UND3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
NPIPA1Q9UND3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms