Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.46
RIMBP3Q9UFD9 BANF1P3-201ENST00000412556 261 ntBASIC24.14■■□□□ 1.46
RIMBP3Q9UFD9 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
RIMBP3Q9UFD9 HIST1H2APS2-201ENST00000454426 370 ntBASIC24.14■■□□□ 1.46
RIMBP3Q9UFD9 AC063952.3-201ENST00000467756 308 ntBASIC24.14■■□□□ 1.46
RIMBP3Q9UFD9 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC24.14■■□□□ 1.46
RIMBP3Q9UFD9 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC24.14■■□□□ 1.46
RIMBP3Q9UFD9 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC24.14■■□□□ 1.46
RIMBP3Q9UFD9 AC020904.3-201ENST00000624199 442 ntBASIC24.14■■□□□ 1.46
RIMBP3Q9UFD9 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC24.14■■□□□ 1.46
RIMBP3Q9UFD9 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC24.14■■□□□ 1.46
RIMBP3Q9UFD9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RIMBP3Q9UFD9 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RIMBP3Q9UFD9 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
RIMBP3Q9UFD9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RIMBP3Q9UFD9 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 RNA5SP359-201ENST00000364838 113 ntBASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 RNLS-203ENST00000437752 525 ntTSL 2 BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 PPIA-208ENST00000489459 907 ntTSL 2 BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 PPIA-210ENST00000620047 827 ntTSL 5 BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 OLA1P2-201ENST00000395519 1264 ntBASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 AC006483.2-201ENST00000609813 515 ntBASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC24.13■■□□□ 1.45
RIMBP3Q9UFD9 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
RIMBP3Q9UFD9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
RIMBP3Q9UFD9 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RIMBP3Q9UFD9 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RIMBP3Q9UFD9 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
RIMBP3Q9UFD9 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
RIMBP3Q9UFD9 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC24.12■■□□□ 1.45
RIMBP3Q9UFD9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RIMBP3Q9UFD9 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC24.12■■□□□ 1.45
RIMBP3Q9UFD9 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RIMBP3Q9UFD9 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RIMBP3Q9UFD9 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RIMBP3Q9UFD9 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
RIMBP3Q9UFD9 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC24.12■■□□□ 1.45
RIMBP3Q9UFD9 GUSBP10-201ENST00000417412 665 ntBASIC24.12■■□□□ 1.45
RIMBP3Q9UFD9 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RIMBP3Q9UFD9 CYP4F36P-201ENST00000589193 186 ntBASIC24.12■■□□□ 1.45
RIMBP3Q9UFD9 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RIMBP3Q9UFD9 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RIMBP3Q9UFD9 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 AC108734.2-201ENST00000420887 1069 ntBASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 AC108724.1-201ENST00000481669 352 ntBASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 DUX4L47-201ENST00000566374 394 ntBASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 MED11-202ENST00000573708 802 ntTSL 2 BASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 AC080013.5-201ENST00000607044 679 ntBASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 AP000322.3-201ENST00000608665 388 ntBASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 AC010976.2-201ENST00000609697 852 ntBASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 CROCCP2-202ENST00000412962 2773 ntBASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RIMBP3Q9UFD9 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RIMBP3Q9UFD9 MIR1301-201ENST00000408518 82 ntBASIC24.1■■□□□ 1.45
RIMBP3Q9UFD9 AL512306.1-201ENST00000432698 848 ntBASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms