Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 LINC02447-202ENST00000501888 2146 ntBASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 MIR4313-201ENST00000580760 101 ntBASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 AC000095.1-201ENST00000603208 874 ntBASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 AL033527.5-201ENST00000641382 801 ntBASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLCF1Q9UBD9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLCF1Q9UBD9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14□□□□□ -0.17
CLCF1Q9UBD9 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLCF1Q9UBD9 AL121723.1-201ENST00000445194 1519 ntBASIC14□□□□□ -0.17
CLCF1Q9UBD9 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLCF1Q9UBD9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14□□□□□ -0.17
CLCF1Q9UBD9 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLCF1Q9UBD9 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLCF1Q9UBD9 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLCF1Q9UBD9 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CLCF1Q9UBD9 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14□□□□□ -0.17
CLCF1Q9UBD9 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLCF1Q9UBD9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLCF1Q9UBD9 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
CLCF1Q9UBD9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLCF1Q9UBD9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLCF1Q9UBD9 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLCF1Q9UBD9 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLCF1Q9UBD9 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CLCF1Q9UBD9 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLCF1Q9UBD9 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLCF1Q9UBD9 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLCF1Q9UBD9 OR8S1-201ENST00000310194 1080 ntBASIC14□□□□□ -0.17
CLCF1Q9UBD9 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLCF1Q9UBD9 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLCF1Q9UBD9 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CLCF1Q9UBD9 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14□□□□□ -0.17
CLCF1Q9UBD9 TTTY23B-201ENST00000442790 549 ntBASIC14□□□□□ -0.17
CLCF1Q9UBD9 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CLCF1Q9UBD9 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14□□□□□ -0.17
CLCF1Q9UBD9 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14□□□□□ -0.17
CLCF1Q9UBD9 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14□□□□□ -0.17
CLCF1Q9UBD9 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14□□□□□ -0.17
CLCF1Q9UBD9 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14□□□□□ -0.17
CLCF1Q9UBD9 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14□□□□□ -0.17
CLCF1Q9UBD9 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14□□□□□ -0.17
CLCF1Q9UBD9 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14□□□□□ -0.17
CLCF1Q9UBD9 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14□□□□□ -0.17
CLCF1Q9UBD9 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLCF1Q9UBD9 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
CLCF1Q9UBD9 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLCF1Q9UBD9 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14□□□□□ -0.17
CLCF1Q9UBD9 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLCF1Q9UBD9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14□□□□□ -0.17
CLCF1Q9UBD9 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CLCF1Q9UBD9 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CLCF1Q9UBD9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
CLCF1Q9UBD9 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14□□□□□ -0.17
CLCF1Q9UBD9 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLCF1Q9UBD9 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14□□□□□ -0.17
CLCF1Q9UBD9 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
CLCF1Q9UBD9 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms