Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 MIR661-201ENST00000384842 89 ntBASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 HMGN1P19-201ENST00000436976 333 ntBASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 DOC2GP-202ENST00000514950 1163 ntBASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ECHDC1Q9NTX5 AL162727.3-201ENST00000635661 2787 ntBASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 AL121723.1-201ENST00000445194 1519 ntBASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 AL133267.1-201ENST00000398220 340 ntBASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 SPTLC1P1-201ENST00000447199 261 ntBASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 SERBP1P5-201ENST00000510079 1181 ntBASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 AL391069.4-201ENST00000609583 481 ntBASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 AC009118.2-201ENST00000613275 655 ntBASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 AL158212.4-201ENST00000624062 1286 ntBASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 API5-202ENST00000420461 2009 ntTSL 2 BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ECHDC1Q9NTX5 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC19.14■□□□□ 0.66
ECHDC1Q9NTX5 PPT1-215ENST00000641471 2368 ntBASIC19.14■□□□□ 0.66
ECHDC1Q9NTX5 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.14■□□□□ 0.66
ECHDC1Q9NTX5 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
ECHDC1Q9NTX5 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
ECHDC1Q9NTX5 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ECHDC1Q9NTX5 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 GNAQP1-201ENST00000444815 1067 ntBASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 KRT18P43-201ENST00000469825 1281 ntBASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms