Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRIM2Q9C040 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRIM2Q9C040 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRIM2Q9C040 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.59□□□□□ -0.07
TRIM2Q9C040 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.59□□□□□ -0.07
TRIM2Q9C040 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.58□□□□□ -0.07
TRIM2Q9C040 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRIM2Q9C040 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
TRIM2Q9C040 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRIM2Q9C040 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRIM2Q9C040 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TRIM2Q9C040 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRIM2Q9C040 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM2Q9C040 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM2Q9C040 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM2Q9C040 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM2Q9C040 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM2Q9C040 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
TRIM2Q9C040 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.58□□□□□ -0.08
TRIM2Q9C040 AC105250.1-201ENST00000509378 2057 ntBASIC14.58□□□□□ -0.08
TRIM2Q9C040 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM2Q9C040 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM2Q9C040 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM2Q9C040 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TRIM2Q9C040 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
TRIM2Q9C040 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM2Q9C040 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TRIM2Q9C040 AL645939.2-201ENST00000427340 991 ntBASIC14.58□□□□□ -0.08
TRIM2Q9C040 EEF1DP4-201ENST00000446006 880 ntBASIC14.58□□□□□ -0.08
TRIM2Q9C040 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.58□□□□□ -0.08
TRIM2Q9C040 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM2Q9C040 PHKG1P2-201ENST00000457537 863 ntBASIC14.58□□□□□ -0.08
TRIM2Q9C040 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM2Q9C040 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM2Q9C040 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM2Q9C040 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM2Q9C040 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM2Q9C040 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.58□□□□□ -0.08
TRIM2Q9C040 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.58□□□□□ -0.08
TRIM2Q9C040 AC022145.2-201ENST00000598203 171 ntBASIC14.58□□□□□ -0.08
TRIM2Q9C040 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM2Q9C040 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM2Q9C040 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRIM2Q9C040 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM2Q9C040 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM2Q9C040 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM2Q9C040 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM2Q9C040 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM2Q9C040 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM2Q9C040 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM2Q9C040 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM2Q9C040 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM2Q9C040 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM2Q9C040 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM2Q9C040 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM2Q9C040 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM2Q9C040 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM2Q9C040 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM2Q9C040 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRIM2Q9C040 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM2Q9C040 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM2Q9C040 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM2Q9C040 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM2Q9C040 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRIM2Q9C040 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM2Q9C040 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM2Q9C040 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM2Q9C040 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM2Q9C040 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM2Q9C040 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM2Q9C040 C8orf49-201ENST00000525043 1968 ntBASIC14.57□□□□□ -0.08
TRIM2Q9C040 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM2Q9C040 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM2Q9C040 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRIM2Q9C040 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM2Q9C040 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM2Q9C040 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM2Q9C040 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM2Q9C040 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM2Q9C040 TSEN15P1-201ENST00000423257 515 ntBASIC14.57□□□□□ -0.08
TRIM2Q9C040 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM2Q9C040 AL353705.2-201ENST00000428243 662 ntBASIC14.57□□□□□ -0.08
TRIM2Q9C040 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.57□□□□□ -0.08
TRIM2Q9C040 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIM2Q9C040 CYMP-203ENST00000474680 1263 ntBASIC14.57□□□□□ -0.08
TRIM2Q9C040 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.57□□□□□ -0.08
TRIM2Q9C040 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIM2Q9C040 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM2Q9C040 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
TRIM2Q9C040 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.57□□□□□ -0.08
TRIM2Q9C040 MIR4313-201ENST00000580760 101 ntBASIC14.57□□□□□ -0.08
TRIM2Q9C040 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM2Q9C040 PPT1-215ENST00000641471 2368 ntBASIC14.57□□□□□ -0.08
TRIM2Q9C040 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRIM2Q9C040 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM2Q9C040 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM2Q9C040 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM2Q9C040 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM2Q9C040 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIM2Q9C040 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms