Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.05□□□□□ -0.48
VGLL1Q99990 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.05□□□□□ -0.48
VGLL1Q99990 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.05□□□□□ -0.48
VGLL1Q99990 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
VGLL1Q99990 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.05□□□□□ -0.48
VGLL1Q99990 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
VGLL1Q99990 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VGLL1Q99990 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
VGLL1Q99990 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
VGLL1Q99990 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
VGLL1Q99990 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VGLL1Q99990 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
VGLL1Q99990 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.04□□□□□ -0.48
VGLL1Q99990 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
VGLL1Q99990 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.04□□□□□ -0.48
VGLL1Q99990 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.04□□□□□ -0.48
VGLL1Q99990 AC025580.3-201ENST00000617932 1424 ntBASIC12.04□□□□□ -0.48
VGLL1Q99990 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.04□□□□□ -0.48
VGLL1Q99990 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VGLL1Q99990 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
VGLL1Q99990 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.04□□□□□ -0.48
VGLL1Q99990 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VGLL1Q99990 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VGLL1Q99990 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.04□□□□□ -0.48
VGLL1Q99990 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.04□□□□□ -0.48
VGLL1Q99990 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
VGLL1Q99990 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VGLL1Q99990 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
VGLL1Q99990 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
VGLL1Q99990 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.04□□□□□ -0.48
VGLL1Q99990 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.04□□□□□ -0.48
VGLL1Q99990 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.04□□□□□ -0.48
VGLL1Q99990 KRT126P-201ENST00000549467 1181 ntBASIC12.04□□□□□ -0.48
VGLL1Q99990 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.04□□□□□ -0.48
VGLL1Q99990 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.04□□□□□ -0.48
VGLL1Q99990 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.04□□□□□ -0.48
VGLL1Q99990 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
VGLL1Q99990 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
VGLL1Q99990 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.04□□□□□ -0.48
VGLL1Q99990 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.04□□□□□ -0.48
VGLL1Q99990 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.04□□□□□ -0.48
VGLL1Q99990 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VGLL1Q99990 AC112693.3-201ENST00000624819 1983 ntBASIC12.04□□□□□ -0.48
VGLL1Q99990 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
VGLL1Q99990 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
VGLL1Q99990 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
VGLL1Q99990 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.04□□□□□ -0.48
VGLL1Q99990 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
VGLL1Q99990 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
VGLL1Q99990 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
VGLL1Q99990 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
VGLL1Q99990 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.04□□□□□ -0.48
VGLL1Q99990 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VGLL1Q99990 C18orf15-201ENST00000623680 2534 ntBASIC12.04□□□□□ -0.48
VGLL1Q99990 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.04□□□□□ -0.48
VGLL1Q99990 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VGLL1Q99990 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
VGLL1Q99990 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VGLL1Q99990 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VGLL1Q99990 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.04□□□□□ -0.48
VGLL1Q99990 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.04□□□□□ -0.48
VGLL1Q99990 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VGLL1Q99990 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VGLL1Q99990 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VGLL1Q99990 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VGLL1Q99990 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VGLL1Q99990 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VGLL1Q99990 AC138969.2-201ENST00000532739 9932 ntBASIC12.04□□□□□ -0.48
VGLL1Q99990 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
VGLL1Q99990 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.04□□□□□ -0.48
VGLL1Q99990 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.04□□□□□ -0.48
VGLL1Q99990 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VGLL1Q99990 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VGLL1Q99990 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VGLL1Q99990 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.03□□□□□ -0.48
VGLL1Q99990 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
VGLL1Q99990 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VGLL1Q99990 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VGLL1Q99990 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.03□□□□□ -0.48
VGLL1Q99990 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VGLL1Q99990 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
VGLL1Q99990 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
VGLL1Q99990 WASH6P-202ENST00000359512 1437 ntBASIC12.03□□□□□ -0.48
VGLL1Q99990 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
VGLL1Q99990 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.03□□□□□ -0.48
VGLL1Q99990 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.03□□□□□ -0.48
VGLL1Q99990 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
VGLL1Q99990 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.03□□□□□ -0.48
VGLL1Q99990 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.03□□□□□ -0.48
VGLL1Q99990 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VGLL1Q99990 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
VGLL1Q99990 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
VGLL1Q99990 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
VGLL1Q99990 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
VGLL1Q99990 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms