Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
NDNQ99608 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDNQ99608 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.9■□□□□ 0.14
NDNQ99608 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDNQ99608 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDNQ99608 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDNQ99608 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NDNQ99608 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDNQ99608 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NDNQ99608 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDNQ99608 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.9■□□□□ 0.14
NDNQ99608 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.9■□□□□ 0.14
NDNQ99608 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDNQ99608 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.9■□□□□ 0.14
NDNQ99608 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDNQ99608 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDNQ99608 REXO1L1P-202ENST00000608646 1974 ntBASIC15.9■□□□□ 0.14
NDNQ99608 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.9■□□□□ 0.14
NDNQ99608 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.9■□□□□ 0.14
NDNQ99608 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.9■□□□□ 0.14
NDNQ99608 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.9■□□□□ 0.14
NDNQ99608 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.9■□□□□ 0.14
NDNQ99608 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.9■□□□□ 0.14
NDNQ99608 KRT8P23-201ENST00000560090 1207 ntBASIC15.9■□□□□ 0.14
NDNQ99608 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.9■□□□□ 0.14
NDNQ99608 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.9■□□□□ 0.14
NDNQ99608 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDNQ99608 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
NDNQ99608 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
NDNQ99608 AC009090.5-201ENST00000624886 2285 ntBASIC15.9■□□□□ 0.14
NDNQ99608 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
NDNQ99608 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.9■□□□□ 0.14
NDNQ99608 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
NDNQ99608 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.9■□□□□ 0.14
NDNQ99608 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.9■□□□□ 0.14
NDNQ99608 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDNQ99608 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDNQ99608 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
NDNQ99608 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NDNQ99608 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
NDNQ99608 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDNQ99608 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDNQ99608 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NDNQ99608 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDNQ99608 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NDNQ99608 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDNQ99608 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.9■□□□□ 0.14
NDNQ99608 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDNQ99608 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NDNQ99608 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDNQ99608 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.89■□□□□ 0.13
NDNQ99608 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.89■□□□□ 0.13
NDNQ99608 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
NDNQ99608 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDNQ99608 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDNQ99608 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NDNQ99608 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDNQ99608 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDNQ99608 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NDNQ99608 AP3S2-216ENST00000617003 1561 ntBASIC15.89■□□□□ 0.13
NDNQ99608 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
NDNQ99608 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDNQ99608 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDNQ99608 RPS8P6-201ENST00000426177 609 ntBASIC15.89■□□□□ 0.13
NDNQ99608 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.89■□□□□ 0.13
NDNQ99608 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NDNQ99608 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.89■□□□□ 0.13
NDNQ99608 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.89■□□□□ 0.13
NDNQ99608 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.89■□□□□ 0.13
NDNQ99608 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.89■□□□□ 0.13
NDNQ99608 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.89■□□□□ 0.13
NDNQ99608 AC022145.2-201ENST00000598203 171 ntBASIC15.89■□□□□ 0.13
NDNQ99608 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
NDNQ99608 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.89■□□□□ 0.13
NDNQ99608 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
NDNQ99608 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDNQ99608 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.89■□□□□ 0.13
NDNQ99608 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
NDNQ99608 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NDNQ99608 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDNQ99608 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDNQ99608 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NDNQ99608 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDNQ99608 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDNQ99608 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.89■□□□□ 0.13
NDNQ99608 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
NDNQ99608 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDNQ99608 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NDNQ99608 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.89■□□□□ 0.13
NDNQ99608 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NDNQ99608 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.88■□□□□ 0.13
NDNQ99608 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.88■□□□□ 0.13
NDNQ99608 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NDNQ99608 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.88■□□□□ 0.13
NDNQ99608 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NDNQ99608 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NDNQ99608 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NDNQ99608 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.88■□□□□ 0.13
NDNQ99608 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NDNQ99608 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms