Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 AL139384.1-201ENST00000612143 3047 ntBASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 MIR326-201ENST00000362220 95 ntBASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 YBX1P6-201ENST00000442962 1002 ntBASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 RN7SL713P-201ENST00000582127 302 ntBASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 AC006453.4-201ENST00000636949 1252 ntBASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.21■□□□□ 0.5
CDK5RAP2Q96SN8 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 FAM197Y7-201ENST00000432892 766 ntBASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 MST1L-201ENST00000442552 2185 ntBASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 FAM8A4P-201ENST00000435433 1213 ntBASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP2Q96SN8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CDK5RAP2Q96SN8 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms