Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
IFT43Q96FT9 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.35■□□□□ 0.21
IFT43Q96FT9 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.35■□□□□ 0.21
IFT43Q96FT9 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
IFT43Q96FT9 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
IFT43Q96FT9 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT43Q96FT9 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT43Q96FT9 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT43Q96FT9 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT43Q96FT9 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
IFT43Q96FT9 AC104581.4-201ENST00000623126 3052 ntBASIC16.34■□□□□ 0.21
IFT43Q96FT9 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 AC010491.1-201ENST00000563101 2797 ntBASIC16.34■□□□□ 0.21
IFT43Q96FT9 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 AC006058.4-201ENST00000624016 1670 ntBASIC16.34■□□□□ 0.21
IFT43Q96FT9 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 TREML5P-201ENST00000421694 576 ntBASIC16.34■□□□□ 0.21
IFT43Q96FT9 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.34■□□□□ 0.21
IFT43Q96FT9 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.34■□□□□ 0.21
IFT43Q96FT9 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
IFT43Q96FT9 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.34■□□□□ 0.21
IFT43Q96FT9 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
IFT43Q96FT9 AC069224.1-201ENST00000566372 1715 ntBASIC16.33■□□□□ 0.21
IFT43Q96FT9 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
IFT43Q96FT9 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
IFT43Q96FT9 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
IFT43Q96FT9 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
IFT43Q96FT9 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
IFT43Q96FT9 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
IFT43Q96FT9 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
IFT43Q96FT9 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
IFT43Q96FT9 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
IFT43Q96FT9 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
IFT43Q96FT9 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
IFT43Q96FT9 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.33■□□□□ 0.2
IFT43Q96FT9 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.33■□□□□ 0.2
IFT43Q96FT9 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IFT43Q96FT9 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.33■□□□□ 0.2
IFT43Q96FT9 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
IFT43Q96FT9 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IFT43Q96FT9 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IFT43Q96FT9 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.33■□□□□ 0.2
IFT43Q96FT9 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.33■□□□□ 0.2
IFT43Q96FT9 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.33■□□□□ 0.2
IFT43Q96FT9 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.33■□□□□ 0.2
IFT43Q96FT9 AC097493.3-201ENST00000509725 367 ntBASIC16.33■□□□□ 0.2
IFT43Q96FT9 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
IFT43Q96FT9 AC026979.3-201ENST00000607315 403 ntBASIC16.33■□□□□ 0.2
IFT43Q96FT9 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
IFT43Q96FT9 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
IFT43Q96FT9 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
IFT43Q96FT9 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms