Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 DPM3-202ENST00000368399 517 ntBASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 AC100850.1-201ENST00000506768 649 ntBASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 LRRC59-203ENST00000576448 1531 ntBASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM43Q96BQ3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 AL354877.1-201ENST00000424412 413 ntBASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 HIST2H2BB-201ENST00000449108 381 ntBASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 AP003171.2-201ENST00000528208 925 ntBASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 OR10B1P-201ENST00000601666 907 ntBASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 AC026740.1-201ENST00000607068 791 ntBASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM43Q96BQ3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 AC114501.1-201ENST00000445949 172 ntBASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 AC100757.4-201ENST00000626934 759 ntBASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 PKD1P1-201ENST00000458669 6805 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms