Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
RPGRQ92834 MPV17-205ENST00000402310 906 ntTSL 5 BASIC19.27■□□□□ 0.68
RPGRQ92834 SLC25A24P2-201ENST00000415059 510 ntBASIC19.27■□□□□ 0.68
RPGRQ92834 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.27■□□□□ 0.68
RPGRQ92834 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPGRQ92834 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RPGRQ92834 HLA-DPB2-205ENST00000435074 1188 ntBASIC19.27■□□□□ 0.68
RPGRQ92834 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.27■□□□□ 0.68
RPGRQ92834 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC19.27■□□□□ 0.68
RPGRQ92834 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC19.27■□□□□ 0.68
RPGRQ92834 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPGRQ92834 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC19.27■□□□□ 0.68
RPGRQ92834 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.27■□□□□ 0.68
RPGRQ92834 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
RPGRQ92834 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.27■□□□□ 0.68
RPGRQ92834 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPGRQ92834 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPGRQ92834 AC244452.3-201ENST00000636814 210 ntBASIC19.27■□□□□ 0.68
RPGRQ92834 AC006453.4-201ENST00000636949 1252 ntBASIC19.27■□□□□ 0.68
RPGRQ92834 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RPGRQ92834 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPGRQ92834 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPGRQ92834 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.27■□□□□ 0.67
RPGRQ92834 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RPGRQ92834 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RPGRQ92834 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
RPGRQ92834 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
RPGRQ92834 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RPGRQ92834 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPGRQ92834 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPGRQ92834 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPGRQ92834 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPGRQ92834 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPGRQ92834 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPGRQ92834 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPGRQ92834 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPGRQ92834 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC19.26■□□□□ 0.67
RPGRQ92834 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC19.26■□□□□ 0.67
RPGRQ92834 IGHJ2P-201ENST00000454480 60 ntBASIC19.26■□□□□ 0.67
RPGRQ92834 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.26■□□□□ 0.67
RPGRQ92834 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC19.26■□□□□ 0.67
RPGRQ92834 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPGRQ92834 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC19.26■□□□□ 0.67
RPGRQ92834 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC19.26■□□□□ 0.67
RPGRQ92834 EEF1DP1-201ENST00000585891 896 ntBASIC19.26■□□□□ 0.67
RPGRQ92834 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC19.26■□□□□ 0.67
RPGRQ92834 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC19.26■□□□□ 0.67
RPGRQ92834 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC19.26■□□□□ 0.67
RPGRQ92834 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.26■□□□□ 0.67
RPGRQ92834 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RPGRQ92834 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC19.26■□□□□ 0.67
RPGRQ92834 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.26■□□□□ 0.67
RPGRQ92834 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPGRQ92834 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.26■□□□□ 0.67
RPGRQ92834 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPGRQ92834 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.26■□□□□ 0.67
RPGRQ92834 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPGRQ92834 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPGRQ92834 AC011676.5-201ENST00000624864 2660 ntBASIC19.26■□□□□ 0.67
RPGRQ92834 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPGRQ92834 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
RPGRQ92834 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RPGRQ92834 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.25■□□□□ 0.67
RPGRQ92834 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RPGRQ92834 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPGRQ92834 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RPGRQ92834 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPGRQ92834 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPGRQ92834 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPGRQ92834 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RPGRQ92834 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPGRQ92834 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPGRQ92834 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPGRQ92834 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPGRQ92834 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPGRQ92834 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.25■□□□□ 0.67
RPGRQ92834 RNU1-114P-201ENST00000365297 166 ntBASIC19.25■□□□□ 0.67
RPGRQ92834 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RPGRQ92834 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPGRQ92834 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RPGRQ92834 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RPGRQ92834 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RPGRQ92834 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC19.25■□□□□ 0.67
RPGRQ92834 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPGRQ92834 RHOQP1-201ENST00000555758 579 ntBASIC19.25■□□□□ 0.67
RPGRQ92834 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC19.25■□□□□ 0.67
RPGRQ92834 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC19.25■□□□□ 0.67
RPGRQ92834 AC104982.3-201ENST00000581995 514 ntBASIC19.25■□□□□ 0.67
RPGRQ92834 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC19.25■□□□□ 0.67
RPGRQ92834 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC19.25■□□□□ 0.67
RPGRQ92834 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPGRQ92834 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.25■□□□□ 0.67
RPGRQ92834 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.25■□□□□ 0.67
RPGRQ92834 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPGRQ92834 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPGRQ92834 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
RPGRQ92834 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
RPGRQ92834 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPGRQ92834 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPGRQ92834 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms