Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CASKIN1Q8WXD9 BTBD6P1-201ENST00000412176 1267 ntBASIC24.03■■□□□ 1.44
CASKIN1Q8WXD9 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC24.03■■□□□ 1.44
CASKIN1Q8WXD9 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC24.03■■□□□ 1.44
CASKIN1Q8WXD9 AC104306.2-201ENST00000451877 341 ntBASIC24.03■■□□□ 1.44
CASKIN1Q8WXD9 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
CASKIN1Q8WXD9 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CASKIN1Q8WXD9 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CASKIN1Q8WXD9 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC24.03■■□□□ 1.44
CASKIN1Q8WXD9 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC24.03■■□□□ 1.44
CASKIN1Q8WXD9 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CASKIN1Q8WXD9 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CASKIN1Q8WXD9 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CASKIN1Q8WXD9 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CASKIN1Q8WXD9 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CASKIN1Q8WXD9 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC24.03■■□□□ 1.44
CASKIN1Q8WXD9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CASKIN1Q8WXD9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CASKIN1Q8WXD9 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CASKIN1Q8WXD9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
CASKIN1Q8WXD9 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC24.03■■□□□ 1.44
CASKIN1Q8WXD9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC24.02■■□□□ 1.44
CASKIN1Q8WXD9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
CASKIN1Q8WXD9 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC24.02■■□□□ 1.44
CASKIN1Q8WXD9 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC24.02■■□□□ 1.44
CASKIN1Q8WXD9 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC24.02■■□□□ 1.44
CASKIN1Q8WXD9 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CASKIN1Q8WXD9 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
CASKIN1Q8WXD9 RN7SL713P-201ENST00000582127 302 ntBASIC24.02■■□□□ 1.44
CASKIN1Q8WXD9 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC24.02■■□□□ 1.44
CASKIN1Q8WXD9 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC24.02■■□□□ 1.44
CASKIN1Q8WXD9 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CASKIN1Q8WXD9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC24.02■■□□□ 1.44
CASKIN1Q8WXD9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CASKIN1Q8WXD9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CASKIN1Q8WXD9 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CASKIN1Q8WXD9 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC24.02■■□□□ 1.44
CASKIN1Q8WXD9 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC24.02■■□□□ 1.44
CASKIN1Q8WXD9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
CASKIN1Q8WXD9 AL118508.1-201ENST00000613502 2345 ntBASIC24.02■■□□□ 1.44
CASKIN1Q8WXD9 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CASKIN1Q8WXD9 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CASKIN1Q8WXD9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
CASKIN1Q8WXD9 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CASKIN1Q8WXD9 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CASKIN1Q8WXD9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 GHSR-202ENST00000427970 912 ntBASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 STK33-217ENST00000534493 1895 ntTSL 2 BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 TPM3P8-201ENST00000330554 643 ntBASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 AC079178.1-201ENST00000420915 656 ntBASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 RGS5-214ENST00000429865 754 ntTSL 3 BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 AC004898.1-201ENST00000451057 766 ntBASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 OARD1-212ENST00000482515 832 ntTSL 2 BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 TNRC18P3-201ENST00000441896 2691 ntBASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CASKIN1Q8WXD9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
CASKIN1Q8WXD9 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC24■■□□□ 1.43
CASKIN1Q8WXD9 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
CASKIN1Q8WXD9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC24■■□□□ 1.43
CASKIN1Q8WXD9 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CASKIN1Q8WXD9 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CASKIN1Q8WXD9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC24■■□□□ 1.43
CASKIN1Q8WXD9 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CASKIN1Q8WXD9 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC24■■□□□ 1.43
CASKIN1Q8WXD9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CASKIN1Q8WXD9 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC24■■□□□ 1.43
CASKIN1Q8WXD9 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC24■■□□□ 1.43
CASKIN1Q8WXD9 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC24■■□□□ 1.43
CASKIN1Q8WXD9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
CASKIN1Q8WXD9 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CASKIN1Q8WXD9 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CASKIN1Q8WXD9 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CASKIN1Q8WXD9 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC24■■□□□ 1.43
CASKIN1Q8WXD9 TISP43-201ENST00000409793 538 ntTSL 4 BASIC24■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms