Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.52■□□□□ 0.23
TRAF3IP1Q8TDR0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRAF3IP1Q8TDR0 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 UPF3AP3-201ENST00000420996 769 ntBASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 AC112482.1-201ENST00000492080 688 ntBASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 AC092865.5-201ENST00000545435 363 ntBASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 DBET-201ENST00000630918 3363 ntBASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 MST1L-201ENST00000442552 2185 ntBASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAF3IP1Q8TDR0 TMBIM7P-203ENST00000641617 1718 ntBASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 RPSAP43-201ENST00000402237 625 ntBASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 AC211486.1-202ENST00000416371 468 ntBASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 RBPMS2P1-201ENST00000437762 623 ntBASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 AC211476.1-201ENST00000503899 468 ntBASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 AC003101.2-201ENST00000612557 442 ntBASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 AC018529.1-201ENST00000613063 361 ntBASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 AL596257.1-201ENST00000641463 2694 ntBASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRAF3IP1Q8TDR0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 PPT1-215ENST00000641471 2368 ntBASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms