Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CDRT4Q8N9R6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 Z97205.2-201ENST00000564697 1639 ntBASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 METTL21AP1-201ENST00000438852 635 ntBASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 RN7SL618P-201ENST00000477850 296 ntBASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 AL158211.3-201ENST00000607385 239 ntBASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
CDRT4Q8N9R6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms