Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 AL162726.2-201ENST00000438986 1017 ntBASIC16.76■□□□□ 0.27
RNF135Q8IUD6 KRT8P13-201ENST00000463294 1010 ntBASIC16.76■□□□□ 0.27
RNF135Q8IUD6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 AC106872.11-201ENST00000605838 421 ntBASIC16.76■□□□□ 0.27
RNF135Q8IUD6 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF135Q8IUD6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 SLC25A24P2-201ENST00000415059 510 ntBASIC16.75■□□□□ 0.27
RNF135Q8IUD6 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 C2orf69P2-201ENST00000562032 1123 ntBASIC16.75■□□□□ 0.27
RNF135Q8IUD6 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 AC010328.2-201ENST00000597698 1111 ntBASIC16.75■□□□□ 0.27
RNF135Q8IUD6 MIR6727-201ENST00000620702 65 ntBASIC16.75■□□□□ 0.27
RNF135Q8IUD6 CU634019.7-201ENST00000624153 1185 ntBASIC16.75■□□□□ 0.27
RNF135Q8IUD6 FP236241.2-201ENST00000624906 1185 ntBASIC16.75■□□□□ 0.27
RNF135Q8IUD6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 PCGF3-213ENST00000620529 1899 ntBASIC16.75■□□□□ 0.27
RNF135Q8IUD6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RNF135Q8IUD6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RNF135Q8IUD6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF135Q8IUD6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms