Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 AC108751.1-201ENST00000490852 363 ntBASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 PAM16-215ENST00000577031 548 ntTSL 4 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 AJ011931.1-201ENST00000618749 2492 ntBASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 AC139749.1-202ENST00000617529 3139 ntBASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
LINC00242Q5T6M2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 AC005912.2-201ENST00000619492 2400 ntBASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 VN2R19P-201ENST00000442399 1052 ntBASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 KRT18P35-201ENST00000510488 1269 ntBASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 BMF-207ENST00000559701 630 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC00242Q5T6M2 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms