Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 FAM197Y7-201ENST00000432892 766 ntBASIC16.63■□□□□ 0.25
UBE3AQ05086 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.63■□□□□ 0.25
UBE3AQ05086 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 GAPDHP40-201ENST00000505218 1006 ntBASIC16.63■□□□□ 0.25
UBE3AQ05086 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.63■□□□□ 0.25
UBE3AQ05086 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
UBE3AQ05086 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.63■□□□□ 0.25
UBE3AQ05086 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.63■□□□□ 0.25
UBE3AQ05086 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
UBE3AQ05086 TNRC18P3-201ENST00000441896 2691 ntBASIC16.63■□□□□ 0.25
UBE3AQ05086 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
UBE3AQ05086 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.62■□□□□ 0.25
UBE3AQ05086 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE3AQ05086 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.62■□□□□ 0.25
UBE3AQ05086 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
UBE3AQ05086 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE3AQ05086 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE3AQ05086 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
UBE3AQ05086 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE3AQ05086 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE3AQ05086 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE3AQ05086 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE3AQ05086 AL645608.8-201ENST00000606034 2086 ntBASIC16.62■□□□□ 0.25
UBE3AQ05086 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.62■□□□□ 0.25
UBE3AQ05086 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE3AQ05086 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE3AQ05086 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE3AQ05086 CD8B2-202ENST00000417670 633 ntBASIC16.62■□□□□ 0.25
UBE3AQ05086 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE3AQ05086 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.62■□□□□ 0.25
UBE3AQ05086 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
UBE3AQ05086 AC078819.1-201ENST00000547454 765 ntBASIC16.62■□□□□ 0.25
UBE3AQ05086 AC012085.1-201ENST00000548270 765 ntBASIC16.62■□□□□ 0.25
UBE3AQ05086 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.62■□□□□ 0.25
UBE3AQ05086 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.62■□□□□ 0.25
UBE3AQ05086 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.62■□□□□ 0.25
UBE3AQ05086 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.62■□□□□ 0.25
UBE3AQ05086 AC244452.3-201ENST00000636814 210 ntBASIC16.62■□□□□ 0.25
UBE3AQ05086 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.62■□□□□ 0.25
UBE3AQ05086 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.62■□□□□ 0.25
UBE3AQ05086 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
UBE3AQ05086 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE3AQ05086 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.62■□□□□ 0.25
UBE3AQ05086 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.62■□□□□ 0.25
UBE3AQ05086 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
UBE3AQ05086 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
UBE3AQ05086 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
UBE3AQ05086 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE3AQ05086 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE3AQ05086 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBE3AQ05086 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBE3AQ05086 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
UBE3AQ05086 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
UBE3AQ05086 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE3AQ05086 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
UBE3AQ05086 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE3AQ05086 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE3AQ05086 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
UBE3AQ05086 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBE3AQ05086 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE3AQ05086 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE3AQ05086 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
UBE3AQ05086 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBE3AQ05086 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE3AQ05086 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
UBE3AQ05086 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBE3AQ05086 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.61■□□□□ 0.25
UBE3AQ05086 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.61■□□□□ 0.25
UBE3AQ05086 AC104306.2-201ENST00000451877 341 ntBASIC16.61■□□□□ 0.25
UBE3AQ05086 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.61■□□□□ 0.25
UBE3AQ05086 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE3AQ05086 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.61■□□□□ 0.25
UBE3AQ05086 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.61■□□□□ 0.25
UBE3AQ05086 AC106872.11-201ENST00000605838 421 ntBASIC16.61■□□□□ 0.25
UBE3AQ05086 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.61■□□□□ 0.25
UBE3AQ05086 AC145423.3-201ENST00000615987 467 ntBASIC16.61■□□□□ 0.25
UBE3AQ05086 AL008638.5-201ENST00000623814 1298 ntBASIC16.61■□□□□ 0.25
UBE3AQ05086 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.61■□□□□ 0.25
UBE3AQ05086 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
UBE3AQ05086 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
UBE3AQ05086 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
UBE3AQ05086 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE3AQ05086 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE3AQ05086 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
UBE3AQ05086 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBE3AQ05086 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms