Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14□□□□□ -0.17
NKX6-1P78426 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14□□□□□ -0.17
NKX6-1P78426 BANF1P1-201ENST00000553684 263 ntBASIC14□□□□□ -0.17
NKX6-1P78426 AC010336.2-201ENST00000564226 506 ntBASIC14□□□□□ -0.17
NKX6-1P78426 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14□□□□□ -0.17
NKX6-1P78426 RNA5-8SN1-201ENST00000610460 153 ntBASIC14□□□□□ -0.17
NKX6-1P78426 RNA5-8SN5-202ENST00000612463 153 ntBASIC14□□□□□ -0.17
NKX6-1P78426 RNA5-8SN4-201ENST00000613359 153 ntBASIC14□□□□□ -0.17
NKX6-1P78426 TEX28P1-201ENST00000613479 1221 ntBASIC14□□□□□ -0.17
NKX6-1P78426 TEX28P2-201ENST00000617764 1221 ntBASIC14□□□□□ -0.17
NKX6-1P78426 RNA5-8SN5-201ENST00000619471 153 ntBASIC14□□□□□ -0.17
NKX6-1P78426 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
NKX6-1P78426 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14□□□□□ -0.17
NKX6-1P78426 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
NKX6-1P78426 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX6-1P78426 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NKX6-1P78426 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14□□□□□ -0.17
NKX6-1P78426 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NKX6-1P78426 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14□□□□□ -0.17
NKX6-1P78426 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX6-1P78426 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14□□□□□ -0.17
NKX6-1P78426 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NKX6-1P78426 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NKX6-1P78426 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NKX6-1P78426 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX6-1P78426 AL592424.1-201ENST00000563624 1536 ntBASIC14□□□□□ -0.17
NKX6-1P78426 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX6-1P78426 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX6-1P78426 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-1P78426 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-1P78426 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-1P78426 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX6-1P78426 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX6-1P78426 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-1P78426 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NKX6-1P78426 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
NKX6-1P78426 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-1P78426 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-1P78426 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-1P78426 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX6-1P78426 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
NKX6-1P78426 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-1P78426 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-1P78426 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-1P78426 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-1P78426 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NKX6-1P78426 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-1P78426 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-1P78426 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
NKX6-1P78426 RPS2P32-201ENST00000439199 892 ntBASIC13.99□□□□□ -0.17
NKX6-1P78426 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.99□□□□□ -0.17
NKX6-1P78426 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-1P78426 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX6-1P78426 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.99□□□□□ -0.17
NKX6-1P78426 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-1P78426 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX6-1P78426 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX6-1P78426 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX6-1P78426 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX6-1P78426 MIR4321-201ENST00000592276 80 ntBASIC13.99□□□□□ -0.17
NKX6-1P78426 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.99□□□□□ -0.17
NKX6-1P78426 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.99□□□□□ -0.17
NKX6-1P78426 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX6-1P78426 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NKX6-1P78426 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-1P78426 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX6-1P78426 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX6-1P78426 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.99□□□□□ -0.17
NKX6-1P78426 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
NKX6-1P78426 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
NKX6-1P78426 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.99□□□□□ -0.17
NKX6-1P78426 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-1P78426 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-1P78426 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
NKX6-1P78426 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
NKX6-1P78426 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.99□□□□□ -0.17
NKX6-1P78426 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-1P78426 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-1P78426 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-1P78426 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX6-1P78426 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
NKX6-1P78426 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.99□□□□□ -0.17
NKX6-1P78426 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.98□□□□□ -0.17
NKX6-1P78426 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-1P78426 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-1P78426 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-1P78426 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-1P78426 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.98□□□□□ -0.17
NKX6-1P78426 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-1P78426 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-1P78426 AC007950.2-201ENST00000615045 2347 ntBASIC13.98□□□□□ -0.17
NKX6-1P78426 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NKX6-1P78426 AL391825.1-201ENST00000457671 1364 ntBASIC13.98□□□□□ -0.17
NKX6-1P78426 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.98□□□□□ -0.17
NKX6-1P78426 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.98□□□□□ -0.17
NKX6-1P78426 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.98□□□□□ -0.17
NKX6-1P78426 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.98□□□□□ -0.17
NKX6-1P78426 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NKX6-1P78426 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
NKX6-1P78426 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms