Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.08■□□□□ 0.32
SNRPFP62306 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.08■□□□□ 0.32
SNRPFP62306 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.08■□□□□ 0.32
SNRPFP62306 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SNRPFP62306 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNRPFP62306 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SNRPFP62306 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNRPFP62306 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNRPFP62306 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SNRPFP62306 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNRPFP62306 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.08■□□□□ 0.32
SNRPFP62306 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SNRPFP62306 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SNRPFP62306 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.07■□□□□ 0.32
SNRPFP62306 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.07■□□□□ 0.32
SNRPFP62306 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.07■□□□□ 0.32
SNRPFP62306 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.07■□□□□ 0.32
SNRPFP62306 AL158212.4-201ENST00000624062 1286 ntBASIC17.07■□□□□ 0.32
SNRPFP62306 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.07■□□□□ 0.32
SNRPFP62306 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SNRPFP62306 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.07■□□□□ 0.32
SNRPFP62306 PPT1-215ENST00000641471 2368 ntBASIC17.07■□□□□ 0.32
SNRPFP62306 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNRPFP62306 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRPFP62306 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNRPFP62306 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.06■□□□□ 0.32
SNRPFP62306 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.06■□□□□ 0.32
SNRPFP62306 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNRPFP62306 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.06■□□□□ 0.32
SNRPFP62306 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SNRPFP62306 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRPFP62306 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.06■□□□□ 0.32
SNRPFP62306 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.06■□□□□ 0.32
SNRPFP62306 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.06■□□□□ 0.32
SNRPFP62306 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRPFP62306 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRPFP62306 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRPFP62306 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SNRPFP62306 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRPFP62306 FAM207CP-201ENST00000443486 507 ntBASIC17.06■□□□□ 0.32
SNRPFP62306 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRPFP62306 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.06■□□□□ 0.32
SNRPFP62306 DOC2GP-202ENST00000514950 1163 ntBASIC17.06■□□□□ 0.32
SNRPFP62306 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
SNRPFP62306 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.06■□□□□ 0.32
SNRPFP62306 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.06■□□□□ 0.32
SNRPFP62306 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.06■□□□□ 0.32
SNRPFP62306 AL096865.1-201ENST00000606796 927 ntBASIC17.06■□□□□ 0.32
SNRPFP62306 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.06■□□□□ 0.32
SNRPFP62306 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRPFP62306 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
SNRPFP62306 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNRPFP62306 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SNRPFP62306 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
SNRPFP62306 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRPFP62306 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRPFP62306 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRPFP62306 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.06■□□□□ 0.32
SNRPFP62306 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRPFP62306 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNRPFP62306 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.06■□□□□ 0.32
SNRPFP62306 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
SNRPFP62306 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.05■□□□□ 0.32
SNRPFP62306 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.05■□□□□ 0.32
SNRPFP62306 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
SNRPFP62306 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.05■□□□□ 0.32
SNRPFP62306 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.05■□□□□ 0.32
SNRPFP62306 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 AC046158.3-201ENST00000624947 2558 ntBASIC17.05■□□□□ 0.32
SNRPFP62306 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms