Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 AC005622.1-201ENST00000636801 1703 ntBASIC18.1■□□□□ 0.49
CHMP4BP1P59074 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.1■□□□□ 0.49
CHMP4BP1P59074 BTBD7P1-201ENST00000447253 1453 ntBASIC18.1■□□□□ 0.49
CHMP4BP1P59074 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 GIMAP3P-201ENST00000495150 836 ntBASIC18.1■□□□□ 0.49
CHMP4BP1P59074 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 IGHV3-71-201ENST00000523324 359 ntBASIC18.1■□□□□ 0.49
CHMP4BP1P59074 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 TPRX2P-201ENST00000535362 881 ntBASIC18.1■□□□□ 0.49
CHMP4BP1P59074 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 AC004461.2-201ENST00000629517 803 ntBASIC18.1■□□□□ 0.49
CHMP4BP1P59074 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 AL139011.1-202ENST00000642063 584 ntBASIC18.1■□□□□ 0.49
CHMP4BP1P59074 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.1■□□□□ 0.49
CHMP4BP1P59074 ME2P1-201ENST00000426028 1970 ntBASIC18.1■□□□□ 0.49
CHMP4BP1P59074 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 PCGF3-213ENST00000620529 1899 ntBASIC18.09■□□□□ 0.49
CHMP4BP1P59074 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 GPR53P-205ENST00000457298 1084 ntBASIC18.09■□□□□ 0.49
CHMP4BP1P59074 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 IGHV3-72-202ENST00000621503 303 ntBASIC18.09■□□□□ 0.49
CHMP4BP1P59074 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.09■□□□□ 0.49
CHMP4BP1P59074 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
CHMP4BP1P59074 AC068587.6-202ENST00000641839 5619 ntBASIC18.09■□□□□ 0.49
CHMP4BP1P59074 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms