Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PMS1P54277 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PMS1P54277 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.36■□□□□ 0.37
PMS1P54277 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.36■□□□□ 0.37
PMS1P54277 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PMS1P54277 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PMS1P54277 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PMS1P54277 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
PMS1P54277 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PMS1P54277 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PMS1P54277 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PMS1P54277 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PMS1P54277 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PMS1P54277 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.36■□□□□ 0.37
PMS1P54277 TARDBPP1-201ENST00000442013 1203 ntBASIC17.36■□□□□ 0.37
PMS1P54277 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.36■□□□□ 0.37
PMS1P54277 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.36■□□□□ 0.37
PMS1P54277 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.36■□□□□ 0.37
PMS1P54277 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PMS1P54277 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.36■□□□□ 0.37
PMS1P54277 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PMS1P54277 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PMS1P54277 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PMS1P54277 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PMS1P54277 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PMS1P54277 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PMS1P54277 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PMS1P54277 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PMS1P54277 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PMS1P54277 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.36■□□□□ 0.37
PMS1P54277 AC126365.1-201ENST00000578585 1514 ntBASIC17.36■□□□□ 0.37
PMS1P54277 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PMS1P54277 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PMS1P54277 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PMS1P54277 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.36■□□□□ 0.37
PMS1P54277 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.35■□□□□ 0.37
PMS1P54277 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PMS1P54277 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PMS1P54277 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PMS1P54277 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PMS1P54277 AGAP7P-201ENST00000582299 2062 ntBASIC17.35■□□□□ 0.37
PMS1P54277 AGAP14-201ENST00000624701 2060 ntBASIC17.35■□□□□ 0.37
PMS1P54277 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PMS1P54277 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PMS1P54277 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PMS1P54277 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PMS1P54277 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PMS1P54277 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.35■□□□□ 0.37
PMS1P54277 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PMS1P54277 FO393414.2-201ENST00000405153 598 ntBASIC17.35■□□□□ 0.37
PMS1P54277 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PMS1P54277 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.35■□□□□ 0.37
PMS1P54277 AP006288.1-201ENST00000446065 395 ntBASIC17.35■□□□□ 0.37
PMS1P54277 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.35■□□□□ 0.37
PMS1P54277 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.35■□□□□ 0.37
PMS1P54277 AL079307.3-201ENST00000556114 283 ntBASIC17.35■□□□□ 0.37
PMS1P54277 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PMS1P54277 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.35■□□□□ 0.37
PMS1P54277 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.35■□□□□ 0.37
PMS1P54277 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.35■□□□□ 0.37
PMS1P54277 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.35■□□□□ 0.37
PMS1P54277 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PMS1P54277 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.35■□□□□ 0.37
PMS1P54277 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PMS1P54277 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PMS1P54277 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.35■□□□□ 0.37
PMS1P54277 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PMS1P54277 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.35■□□□□ 0.37
PMS1P54277 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PMS1P54277 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
PMS1P54277 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.35■□□□□ 0.37
PMS1P54277 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.35■□□□□ 0.37
PMS1P54277 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PMS1P54277 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PMS1P54277 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.35■□□□□ 0.37
PMS1P54277 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PMS1P54277 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PMS1P54277 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PMS1P54277 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.35■□□□□ 0.37
PMS1P54277 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
PMS1P54277 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PMS1P54277 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.34■□□□□ 0.37
PMS1P54277 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PMS1P54277 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PMS1P54277 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PMS1P54277 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PMS1P54277 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PMS1P54277 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PMS1P54277 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PMS1P54277 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PMS1P54277 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PMS1P54277 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.34■□□□□ 0.37
PMS1P54277 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PMS1P54277 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PMS1P54277 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PMS1P54277 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
PMS1P54277 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.34■□□□□ 0.37
PMS1P54277 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.34■□□□□ 0.37
PMS1P54277 AC254562.1-201ENST00000417586 456 ntBASIC17.34■□□□□ 0.37
PMS1P54277 AL080243.2-201ENST00000418783 582 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms