Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USP6P35125 AC127383.1-201ENST00000444697 1800 ntBASIC20.93■□□□□ 0.94
USP6P35125 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USP6P35125 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USP6P35125 FAM8A4P-201ENST00000435433 1213 ntBASIC20.93■□□□□ 0.94
USP6P35125 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC20.93■□□□□ 0.94
USP6P35125 REEP1-202ENST00000453231 940 ntTSL 2 BASIC20.93■□□□□ 0.94
USP6P35125 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC20.93■□□□□ 0.94
USP6P35125 RNF41-210ENST00000552244 716 ntTSL 3 BASIC20.93■□□□□ 0.94
USP6P35125 RN7SL713P-201ENST00000582127 302 ntBASIC20.93■□□□□ 0.94
USP6P35125 PPY2P-201ENST00000582808 702 ntBASIC20.93■□□□□ 0.94
USP6P35125 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USP6P35125 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
USP6P35125 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP6P35125 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC20.93■□□□□ 0.94
USP6P35125 KLK11-210ENST00000600362 759 ntTSL 3 BASIC20.93■□□□□ 0.94
USP6P35125 AC244452.3-201ENST00000636814 210 ntBASIC20.93■□□□□ 0.94
USP6P35125 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC20.93■□□□□ 0.94
USP6P35125 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.93■□□□□ 0.94
USP6P35125 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
USP6P35125 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USP6P35125 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP6P35125 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP6P35125 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP6P35125 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP6P35125 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP6P35125 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
USP6P35125 AC024909.3-201ENST00000611513 2257 ntBASIC20.92■□□□□ 0.94
USP6P35125 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP6P35125 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC20.92■□□□□ 0.94
USP6P35125 CSH2-202ENST00000345366 598 ntTSL 5 BASIC20.92■□□□□ 0.94
USP6P35125 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC20.92■□□□□ 0.94
USP6P35125 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP6P35125 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC20.92■□□□□ 0.94
USP6P35125 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP6P35125 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP6P35125 SLC25A24P2-201ENST00000415059 510 ntBASIC20.92■□□□□ 0.94
USP6P35125 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC20.92■□□□□ 0.94
USP6P35125 COX5BP1-201ENST00000507622 393 ntBASIC20.92■□□□□ 0.94
USP6P35125 NEU3-202ENST00000526068 431 ntTSL 2 BASIC20.92■□□□□ 0.94
USP6P35125 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP6P35125 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC20.92■□□□□ 0.94
USP6P35125 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC20.92■□□□□ 0.94
USP6P35125 AC020914.3-201ENST00000594712 304 ntBASIC20.92■□□□□ 0.94
USP6P35125 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP6P35125 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP6P35125 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP6P35125 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC20.92■□□□□ 0.94
USP6P35125 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP6P35125 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
USP6P35125 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP6P35125 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP6P35125 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
USP6P35125 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.91■□□□□ 0.94
USP6P35125 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC20.91■□□□□ 0.94
USP6P35125 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP6P35125 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC20.91■□□□□ 0.94
USP6P35125 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP6P35125 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP6P35125 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP6P35125 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP6P35125 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.91■□□□□ 0.94
USP6P35125 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
USP6P35125 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
USP6P35125 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC20.91■□□□□ 0.94
USP6P35125 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
USP6P35125 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC20.91■□□□□ 0.94
USP6P35125 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP6P35125 RGS5-214ENST00000429865 754 ntTSL 3 BASIC20.91■□□□□ 0.94
USP6P35125 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP6P35125 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC20.91■□□□□ 0.94
USP6P35125 INO80C-210ENST00000590757 595 ntTSL 2 BASIC20.91■□□□□ 0.94
USP6P35125 AL451050.2-201ENST00000606967 682 ntBASIC20.91■□□□□ 0.94
USP6P35125 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
USP6P35125 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP6P35125 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
USP6P35125 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC20.91■□□□□ 0.94
USP6P35125 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.91■□□□□ 0.94
USP6P35125 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP6P35125 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC20.91■□□□□ 0.94
USP6P35125 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
USP6P35125 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP6P35125 AC006449.5-201ENST00000610658 2098 ntBASIC20.9■□□□□ 0.94
USP6P35125 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP6P35125 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP6P35125 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP6P35125 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC20.9■□□□□ 0.94
USP6P35125 HLA-K-203ENST00000430151 1046 ntBASIC20.9■□□□□ 0.94
USP6P35125 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC20.9■□□□□ 0.94
USP6P35125 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC20.9■□□□□ 0.94
USP6P35125 PTPA-218ENST00000435132 618 ntTSL 2 BASIC20.9■□□□□ 0.94
USP6P35125 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC20.9■□□□□ 0.94
USP6P35125 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC20.9■□□□□ 0.94
USP6P35125 AL391280.1-201ENST00000506969 1062 ntBASIC20.9■□□□□ 0.94
USP6P35125 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC20.9■□□□□ 0.94
USP6P35125 NCK2-206ENST00000522586 490 ntTSL 5 BASIC20.9■□□□□ 0.94
USP6P35125 OR10B1P-201ENST00000601666 907 ntBASIC20.9■□□□□ 0.94
USP6P35125 AC106872.11-201ENST00000605838 421 ntBASIC20.9■□□□□ 0.94
USP6P35125 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP6P35125 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms