Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.58■□□□□ 0.4
COL11A1P12107 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL11A1P12107 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
COL11A1P12107 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL11A1P12107 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL11A1P12107 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL11A1P12107 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
COL11A1P12107 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.58■□□□□ 0.4
COL11A1P12107 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.58■□□□□ 0.4
COL11A1P12107 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL11A1P12107 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.58■□□□□ 0.4
COL11A1P12107 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL11A1P12107 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
COL11A1P12107 AL021578.1-201ENST00000613646 709 ntBASIC17.58■□□□□ 0.4
COL11A1P12107 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
COL11A1P12107 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.58■□□□□ 0.4
COL11A1P12107 AC068587.10-201ENST00000641210 219 ntBASIC17.58■□□□□ 0.4
COL11A1P12107 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
COL11A1P12107 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.57■□□□□ 0.4
COL11A1P12107 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL11A1P12107 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
COL11A1P12107 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL11A1P12107 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.57■□□□□ 0.4
COL11A1P12107 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
COL11A1P12107 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.57■□□□□ 0.4
COL11A1P12107 KRT8P13-201ENST00000463294 1010 ntBASIC17.57■□□□□ 0.4
COL11A1P12107 AC103810.3-201ENST00000583567 96 ntBASIC17.57■□□□□ 0.4
COL11A1P12107 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.57■□□□□ 0.4
COL11A1P12107 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL11A1P12107 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
COL11A1P12107 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL11A1P12107 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL11A1P12107 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COL11A1P12107 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.57■□□□□ 0.4
COL11A1P12107 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL11A1P12107 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COL11A1P12107 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
COL11A1P12107 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.57■□□□□ 0.4
COL11A1P12107 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.56■□□□□ 0.4
COL11A1P12107 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL11A1P12107 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL11A1P12107 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL11A1P12107 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL11A1P12107 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.56■□□□□ 0.4
COL11A1P12107 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.56■□□□□ 0.4
COL11A1P12107 AC004945.1-201ENST00000416738 983 ntBASIC17.56■□□□□ 0.4
COL11A1P12107 AC114812.1-204ENST00000449669 728 ntBASIC17.56■□□□□ 0.4
COL11A1P12107 RNA5SP486-201ENST00000515961 83 ntBASIC17.56■□□□□ 0.4
COL11A1P12107 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.56■□□□□ 0.4
COL11A1P12107 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
COL11A1P12107 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.56■□□□□ 0.4
COL11A1P12107 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.56■□□□□ 0.4
COL11A1P12107 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.56■□□□□ 0.4
COL11A1P12107 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.56■□□□□ 0.4
COL11A1P12107 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.56■□□□□ 0.4
COL11A1P12107 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.56■□□□□ 0.4
COL11A1P12107 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL11A1P12107 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.56■□□□□ 0.4
COL11A1P12107 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL11A1P12107 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.56■□□□□ 0.4
COL11A1P12107 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL11A1P12107 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL11A1P12107 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL11A1P12107 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
COL11A1P12107 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL11A1P12107 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
COL11A1P12107 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL11A1P12107 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.56■□□□□ 0.4
COL11A1P12107 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL11A1P12107 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL11A1P12107 NUS1P3-201ENST00000423502 862 ntBASIC17.56■□□□□ 0.4
COL11A1P12107 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.56■□□□□ 0.4
COL11A1P12107 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.56■□□□□ 0.4
COL11A1P12107 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.56■□□□□ 0.4
COL11A1P12107 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.56■□□□□ 0.4
COL11A1P12107 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.56■□□□□ 0.4
COL11A1P12107 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COL11A1P12107 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.56■□□□□ 0.4
COL11A1P12107 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
COL11A1P12107 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL11A1P12107 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.56■□□□□ 0.4
COL11A1P12107 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.56■□□□□ 0.4
COL11A1P12107 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL11A1P12107 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
COL11A1P12107 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
COL11A1P12107 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.55■□□□□ 0.4
COL11A1P12107 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL11A1P12107 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL11A1P12107 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.55■□□□□ 0.4
COL11A1P12107 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL11A1P12107 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL11A1P12107 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL11A1P12107 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL11A1P12107 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL11A1P12107 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL11A1P12107 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL11A1P12107 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL11A1P12107 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL11A1P12107 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.55■□□□□ 0.4
COL11A1P12107 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms