Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RARBP10826 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RARBP10826 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RARBP10826 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RARBP10826 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RARBP10826 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RARBP10826 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RARBP10826 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.6■□□□□ 0.41
RARBP10826 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.6■□□□□ 0.41
RARBP10826 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.6■□□□□ 0.41
RARBP10826 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.6■□□□□ 0.41
RARBP10826 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
RARBP10826 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RARBP10826 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.6■□□□□ 0.41
RARBP10826 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.6■□□□□ 0.41
RARBP10826 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.6■□□□□ 0.41
RARBP10826 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RARBP10826 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RARBP10826 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RARBP10826 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RARBP10826 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RARBP10826 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.6■□□□□ 0.41
RARBP10826 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.6■□□□□ 0.41
RARBP10826 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RARBP10826 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RARBP10826 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
RARBP10826 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RARBP10826 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RARBP10826 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RARBP10826 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RARBP10826 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RARBP10826 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RARBP10826 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
RARBP10826 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RARBP10826 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RARBP10826 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.59■□□□□ 0.41
RARBP10826 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RARBP10826 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RARBP10826 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RARBP10826 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RARBP10826 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RARBP10826 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.59■□□□□ 0.41
RARBP10826 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.59■□□□□ 0.41
RARBP10826 Z93015.1-201ENST00000451718 390 ntBASIC17.59■□□□□ 0.41
RARBP10826 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.59■□□□□ 0.41
RARBP10826 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.59■□□□□ 0.41
RARBP10826 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.59■□□□□ 0.41
RARBP10826 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.59■□□□□ 0.41
RARBP10826 AC097359.3-201ENST00000603982 1210 ntBASIC17.59■□□□□ 0.41
RARBP10826 AC107373.2-201ENST00000607735 490 ntBASIC17.59■□□□□ 0.41
RARBP10826 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.59■□□□□ 0.41
RARBP10826 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RARBP10826 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RARBP10826 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.59■□□□□ 0.41
RARBP10826 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RARBP10826 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RARBP10826 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.59■□□□□ 0.41
RARBP10826 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RARBP10826 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.41
RARBP10826 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.58■□□□□ 0.41
RARBP10826 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.58■□□□□ 0.41
RARBP10826 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.58■□□□□ 0.41
RARBP10826 PCDH8P1-201ENST00000428983 2773 ntBASIC17.58■□□□□ 0.41
RARBP10826 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RARBP10826 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.58■□□□□ 0.41
RARBP10826 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.58■□□□□ 0.41
RARBP10826 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RARBP10826 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RARBP10826 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RARBP10826 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RARBP10826 AC006001.1-201ENST00000325130 474 ntBASIC17.58■□□□□ 0.4
RARBP10826 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RARBP10826 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RARBP10826 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RARBP10826 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.58■□□□□ 0.4
RARBP10826 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RARBP10826 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RARBP10826 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.58■□□□□ 0.4
RARBP10826 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RARBP10826 KRT18P25-201ENST00000508931 1278 ntBASIC17.58■□□□□ 0.4
RARBP10826 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RARBP10826 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RARBP10826 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RARBP10826 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.58■□□□□ 0.4
RARBP10826 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.58■□□□□ 0.4
RARBP10826 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.58■□□□□ 0.4
RARBP10826 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RARBP10826 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.58■□□□□ 0.4
RARBP10826 AC138951.2-201ENST00000623455 1161 ntBASIC17.58■□□□□ 0.4
RARBP10826 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RARBP10826 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RARBP10826 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RARBP10826 AC092171.3-201ENST00000610122 2651 ntBASIC17.58■□□□□ 0.4
RARBP10826 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.58■□□□□ 0.4
RARBP10826 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RARBP10826 AC079328.2-201ENST00000561241 3354 ntBASIC17.58■□□□□ 0.4
RARBP10826 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RARBP10826 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.58■□□□□ 0.4
RARBP10826 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RARBP10826 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms