Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RARAP10276 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
RARAP10276 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RARAP10276 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RARAP10276 SNX18-202ENST00000343017 3140 ntBASIC16.6■□□□□ 0.25
RARAP10276 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RARAP10276 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.6■□□□□ 0.25
RARAP10276 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RARAP10276 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
RARAP10276 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RARAP10276 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RARAP10276 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RARAP10276 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RARAP10276 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.6■□□□□ 0.25
RARAP10276 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.6■□□□□ 0.25
RARAP10276 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
RARAP10276 AP006288.1-201ENST00000446065 395 ntBASIC16.6■□□□□ 0.25
RARAP10276 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RARAP10276 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RARAP10276 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RARAP10276 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.6■□□□□ 0.25
RARAP10276 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.6■□□□□ 0.25
RARAP10276 AC003101.2-201ENST00000612557 442 ntBASIC16.6■□□□□ 0.25
RARAP10276 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.6■□□□□ 0.25
RARAP10276 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RARAP10276 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RARAP10276 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RARAP10276 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RARAP10276 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.6■□□□□ 0.25
RARAP10276 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.6■□□□□ 0.25
RARAP10276 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RARAP10276 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.59■□□□□ 0.25
RARAP10276 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.59■□□□□ 0.25
RARAP10276 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.59■□□□□ 0.25
RARAP10276 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RARAP10276 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RARAP10276 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RARAP10276 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RARAP10276 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RARAP10276 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RARAP10276 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RARAP10276 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RARAP10276 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.59■□□□□ 0.25
RARAP10276 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
RARAP10276 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.59■□□□□ 0.25
RARAP10276 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RARAP10276 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.59■□□□□ 0.25
RARAP10276 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.59■□□□□ 0.25
RARAP10276 CNN2P11-201ENST00000429351 262 ntBASIC16.59■□□□□ 0.25
RARAP10276 PHKG1P2-201ENST00000457537 863 ntBASIC16.59■□□□□ 0.25
RARAP10276 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.59■□□□□ 0.25
RARAP10276 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.59■□□□□ 0.25
RARAP10276 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RARAP10276 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RARAP10276 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RARAP10276 AL450472.2-201ENST00000603663 1156 ntBASIC16.59■□□□□ 0.25
RARAP10276 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.59■□□□□ 0.25
RARAP10276 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.59■□□□□ 0.25
RARAP10276 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RARAP10276 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.59■□□□□ 0.25
RARAP10276 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RARAP10276 CICP24-201ENST00000605464 2705 ntBASIC16.59■□□□□ 0.25
RARAP10276 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RARAP10276 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RARAP10276 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.59■□□□□ 0.25
RARAP10276 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RARAP10276 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RARAP10276 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RARAP10276 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RARAP10276 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RARAP10276 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.58■□□□□ 0.25
RARAP10276 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RARAP10276 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
RARAP10276 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.58■□□□□ 0.25
RARAP10276 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
RARAP10276 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RARAP10276 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RARAP10276 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RARAP10276 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.58■□□□□ 0.24
RARAP10276 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RARAP10276 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.58■□□□□ 0.24
RARAP10276 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RARAP10276 AC004967.1-201ENST00000453589 447 ntBASIC16.58■□□□□ 0.24
RARAP10276 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.58■□□□□ 0.24
RARAP10276 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.58■□□□□ 0.24
RARAP10276 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RARAP10276 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.58■□□□□ 0.24
RARAP10276 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
RARAP10276 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.58■□□□□ 0.24
RARAP10276 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.58■□□□□ 0.24
RARAP10276 AC027612.4-201ENST00000605371 583 ntBASIC16.58■□□□□ 0.24
RARAP10276 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RARAP10276 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RARAP10276 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RARAP10276 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.58■□□□□ 0.24
RARAP10276 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RARAP10276 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RARAP10276 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RARAP10276 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.58■□□□□ 0.24
RARAP10276 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms