Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC6P09630 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC6P09630 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
HOXC6P09630 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC6P09630 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC6P09630 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HOXC6P09630 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.67■□□□□ 0.42
HOXC6P09630 SLC25A24P2-201ENST00000415059 510 ntBASIC17.67■□□□□ 0.42
HOXC6P09630 AC091804.1-201ENST00000486888 567 ntBASIC17.67■□□□□ 0.42
HOXC6P09630 RPSAP36-202ENST00000494591 1261 ntBASIC17.67■□□□□ 0.42
HOXC6P09630 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HOXC6P09630 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.67■□□□□ 0.42
HOXC6P09630 AP006547.1-201ENST00000563435 692 ntBASIC17.67■□□□□ 0.42
HOXC6P09630 MIR4741-201ENST00000579822 90 ntBASIC17.67■□□□□ 0.42
HOXC6P09630 EEF1DP1-201ENST00000585891 896 ntBASIC17.67■□□□□ 0.42
HOXC6P09630 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC6P09630 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC6P09630 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.67■□□□□ 0.42
HOXC6P09630 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC6P09630 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HOXC6P09630 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC6P09630 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.67■□□□□ 0.42
HOXC6P09630 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
HOXC6P09630 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.67■□□□□ 0.42
HOXC6P09630 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC6P09630 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC6P09630 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC6P09630 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC6P09630 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC6P09630 AC015818.8-201ENST00000587907 1519 ntBASIC17.67■□□□□ 0.42
HOXC6P09630 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC6P09630 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC6P09630 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC6P09630 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.66■□□□□ 0.42
HOXC6P09630 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC6P09630 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC6P09630 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC6P09630 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.66■□□□□ 0.42
HOXC6P09630 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC6P09630 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC6P09630 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HOXC6P09630 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.66■□□□□ 0.42
HOXC6P09630 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.66■□□□□ 0.42
HOXC6P09630 HOMER2P2-201ENST00000451621 847 ntBASIC17.66■□□□□ 0.42
HOXC6P09630 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.66■□□□□ 0.42
HOXC6P09630 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.66■□□□□ 0.42
HOXC6P09630 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC6P09630 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC6P09630 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.66■□□□□ 0.42
HOXC6P09630 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.66■□□□□ 0.42
HOXC6P09630 BX539320.1-201ENST00000623759 877 ntBASIC17.66■□□□□ 0.42
HOXC6P09630 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC6P09630 AC138028.6-201ENST00000616106 1482 ntBASIC17.66■□□□□ 0.42
HOXC6P09630 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
HOXC6P09630 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC6P09630 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC6P09630 AC018892.3-201ENST00000623986 2499 ntBASIC17.66■□□□□ 0.42
HOXC6P09630 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.66■□□□□ 0.42
HOXC6P09630 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC6P09630 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC6P09630 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC6P09630 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC6P09630 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC6P09630 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
HOXC6P09630 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC6P09630 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC6P09630 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC6P09630 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC6P09630 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
HOXC6P09630 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC6P09630 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXC6P09630 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC6P09630 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC6P09630 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
HOXC6P09630 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
HOXC6P09630 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC6P09630 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.65■□□□□ 0.42
HOXC6P09630 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC6P09630 ACTBP8-201ENST00000403258 1108 ntBASIC17.65■□□□□ 0.42
HOXC6P09630 MIR1202-201ENST00000408529 83 ntBASIC17.65■□□□□ 0.42
HOXC6P09630 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.65■□□□□ 0.42
HOXC6P09630 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.65■□□□□ 0.42
HOXC6P09630 BX284668.4-201ENST00000453917 508 ntBASIC17.65■□□□□ 0.42
HOXC6P09630 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.65■□□□□ 0.42
HOXC6P09630 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXC6P09630 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.65■□□□□ 0.42
HOXC6P09630 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXC6P09630 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXC6P09630 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HOXC6P09630 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.65■□□□□ 0.42
HOXC6P09630 AC092364.2-201ENST00000596710 2692 ntBASIC17.65■□□□□ 0.42
HOXC6P09630 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HOXC6P09630 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.65■□□□□ 0.42
HOXC6P09630 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
HOXC6P09630 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC6P09630 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC6P09630 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXC6P09630 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HOXC6P09630 AC099398.1-201ENST00000567919 2776 ntBASIC17.65■□□□□ 0.42
HOXC6P09630 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms